Pairwise Alignments

Query, 562 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 555 a.a., Energy-dependent translational throttle protein EttA from Pseudomonas sp. S08-1

 Score =  619 bits (1597), Expect = 0.0
 Identities = 304/554 (54%), Positives = 410/554 (74%), Gaps = 7/554 (1%)

Query: 8   IFSMVGVSKAFQPNKNVLKDIYLSFFYGAKIGIIGLNGSGKSTLLKIIAGLEKSYQGEVV 67
           +++M  + K   P + +LK+I LSFF GAKIG++GLNG+GKSTLL+I+AG++  + GE  
Sbjct: 5   VYTMHRLGKVVPPKREILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDTEFDGEAR 64

Query: 68  FSPGYSVGYLAQEPYLDDTKTVKEVVMEGVQPIVDALAEYEEINQKFGLPEYYEDQDKMD 127
             PG +VGYL QEP LD +K+V+E+V E V  I  A A  +E+   +  P    D D  D
Sbjct: 65  AMPGINVGYLPQEPQLDPSKSVREIVEEAVGQIKQAQARLDEVYAAYAEP----DAD-FD 119

Query: 128 ILFARQGELQDIIDATDAWNLDSKLERAMDALRCPPEDQPVVNLSGGERRRVALCRLLLQ 187
            L A Q +L+ I+ A+D  NL+ +LE A DALR P  D  + +LSGGE+RRVALCRLLL 
Sbjct: 120 ALAAEQAKLEAILQASDGHNLERQLEVAADALRLPAWDARIEHLSGGEKRRVALCRLLLS 179

Query: 188 KPDILLLDEPTNHLDAESIDWLEQHLQQYEGTVIAVTHDRYFLDHVAGWILELDRGEGIP 247
            PD+LLLDEPTNHLDA+S+ WLE  L  + GTV+A+THDRYFLD+VAGWILELDRG GIP
Sbjct: 180 APDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIP 239

Query: 248 WKGNYSSWLEQKTKRMEMEEKTASKRRKTLERELEWVRMAPKARQAKGKARLNSYDKLLN 307
           ++GNYS WLE K++R+  E K  S   K ++ ELEWVR   KARQ+K KARL  ++++ +
Sbjct: 240 YEGNYSGWLEAKSERLAQESKQQSAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQS 299

Query: 308 EDLKEKEEKLEIFIPNGPRLGNKVIEAKHVAKAYGDKLLFDDLNFMLPPNGIVGVIGPNG 367
           ++ +++ E  EI+IP GPRLG+KVI+ K+V K YGD++L D+L+F +P   IVGVIG NG
Sbjct: 300 QEFQKRAETNEIYIPAGPRLGDKVIDFKNVTKGYGDRVLIDNLSFSIPKGAIVGVIGGNG 359

Query: 368 AGKTTLFRLIMGLETVDKGEFEVGETVKVSYVDQQHKDIDPNKSVYQVISGGNDLIRMGG 427
           AGK+TLFR++MG ET D G  E+G+TV+++ VDQ   D+D +K+V++ +S G D+I++G 
Sbjct: 360 AGKSTLFRMLMGKETPDSGSIELGDTVQLACVDQSRDDLDGSKTVWEAVSDGFDMIKIGN 419

Query: 428 RDINARAYLSRFNFAGADQEKLCGVLSGGERNRLHLAIALKEEGNVLLLDEPTNDIDVNT 487
            ++ +R Y+ RFNF G DQ+K    LSGGER RLHLA+ LK+  NVLLLDEP+ND+DV T
Sbjct: 420 YEVPSRGYVGRFNFKGGDQQKFVKDLSGGERGRLHLALTLKQGANVLLLDEPSNDLDVET 479

Query: 488 LRALEEGLEDFAGCAVVISHDRWFLDRICTHILAFEGDSNVFYFEGSYSEYEENKLKRLG 547
           LR+LEE L DF G A+VISHDRWFLDR+ THILA+E DS++ +FEG+Y+EYE ++ KRLG
Sbjct: 480 LRSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSHIEFFEGNYTEYEADRKKRLG 539

Query: 548 N--EEPKRVRYRNL 559
           +   +P RVRY+ L
Sbjct: 540 DAAAQPHRVRYKKL 553