Pairwise Alignments

Query, 562 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 555 a.a., fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  634 bits (1636), Expect = 0.0
 Identities = 312/556 (56%), Positives = 415/556 (74%), Gaps = 7/556 (1%)

Query: 6   KIIFSMVGVSKAFQPNKNVLKDIYLSFFYGAKIGIIGLNGSGKSTLLKIIAGLEKSYQGE 65
           + +++M  V K   P +++LK+I LSFF GAKIG++GLNG+GKSTLL+I+AG++K  +GE
Sbjct: 3   QFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGE 62

Query: 66  VVFSPGYSVGYLAQEPYLDDTKTVKEVVMEGVQPIVDALAEYEEINQKFGLPEYYEDQDK 125
               P   +GYL QEP L+   TV+E + E V  +V+AL   +E+   +  P+   D DK
Sbjct: 63  ARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALKRLDEVYALYADPD--ADFDK 120

Query: 126 MDILFARQGELQDIIDATDAWNLDSKLERAMDALRCPPEDQPVVNLSGGERRRVALCRLL 185
              L A QG L++II A D  NL+ +LERA DALR P  D  + NLSGGERRRVALCRLL
Sbjct: 121 ---LAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLL 177

Query: 186 LQKPDILLLDEPTNHLDAESIDWLEQHLQQYEGTVIAVTHDRYFLDHVAGWILELDRGEG 245
           L+KPD+LLLDEPTNHLDAES+ WLE+ L  +EGTV+A+THDRYFLD+VAGWILELDRGEG
Sbjct: 178 LEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEG 237

Query: 246 IPWKGNYSSWLEQKTKRMEMEEKTASKRRKTLERELEWVRMAPKARQAKGKARLNSYDKL 305
           IPW+GNYSSWLEQK +R+  E    + RRK++E+ELEWVR   K RQ+KGKARL  +++L
Sbjct: 238 IPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEEL 297

Query: 306 LNEDLKEKEEKLEIFIPNGPRLGNKVIEAKHVAKAYGDKLLFDDLNFMLPPNGIVGVIGP 365
            + + +++ E  E+FIP GPRLG+KV+E  ++ K+YGD+LL DDL+F +P   IVG+IGP
Sbjct: 298 NSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGP 357

Query: 366 NGAGKTTLFRLIMGLETVDKGEFEVGETVKVSYVDQQHKDIDPNKSVYQVISGGNDLIRM 425
           NGAGK+TLFR+I G E  D G   +GETVK++ VDQ    +D +K+V++ +SGG D++++
Sbjct: 358 NGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKI 417

Query: 426 GGRDINARAYLSRFNFAGADQEKLCGVLSGGERNRLHLAIALKEEGNVLLLDEPTNDIDV 485
           G  ++ +RAY+ RFNF G DQ K  G LSGGER RLHLA  L+  GN+LLLDEPTND+D+
Sbjct: 418 GNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDI 477

Query: 486 NTLRALEEGLEDFAGCAVVISHDRWFLDRICTHILAFEGDSNVFYFEGSYSEYEENKLKR 545
            TLRALE  L +F GCA+VISHDRWFLDRI THIL ++ +  V +FEG+++EYEE K + 
Sbjct: 478 ETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRT 537

Query: 546 LGNE--EPKRVRYRNL 559
           LG +  EPKR++Y+ +
Sbjct: 538 LGADALEPKRIKYKRI 553