Pairwise Alignments

Query, 562 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 636 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  367 bits (942), Expect = e-106
 Identities = 193/533 (36%), Positives = 306/533 (57%), Gaps = 12/533 (2%)

Query: 10  SMVGVSKAFQPNKNVLKDIYLSFFYGAKIGIIGLNGSGKSTLLKIIAGLEKSYQGEVVFS 69
           S+  +SK+F  +K +   I      G KI ++G+NG+GKSTL+KII G+E   +GEV  +
Sbjct: 7   SVEKLSKSFG-DKPLFHQISFGIDQGQKIALVGINGAGKSTLMKIIMGMEIPDEGEVAIN 65

Query: 70  PGYSVGYLAQEPYLDDTKTVKEVVM-EGVQPIVDALAEYEEINQKFGLPEYYEDQDKMDI 128
            G    Y+ Q P  +   T+ + +  +     + A+  Y++           ++ D+++ 
Sbjct: 66  QGIKTAYVHQNPVFEANLTIYQTLFSDSSSEPLKAIEAYQKA--MLAAESGKDNADELNG 123

Query: 129 LFARQGELQDIIDATDAWNLDSKLERAMDALRCPPEDQPVVNLSGGERRRVALCRLLLQK 188
           +  +   LQ       AW+ + +++  +  L     D PV NLSGG+R+RVAL + +L+K
Sbjct: 124 IMEKMDRLQ-------AWDFEYQIKEVLGKLGLHDTDLPVGNLSGGQRKRVALAKAILEK 176

Query: 189 PDILLLDEPTNHLDAESIDWLEQHLQQYEGTVIAVTHDRYFLDHVAGWILELDRGEGIPW 248
           PD+LLLDEPTNHLD ++I+WLE +L +   ++  VTHDRYFL+ V   ILELD G+   +
Sbjct: 177 PDLLLLDEPTNHLDLKTIEWLEDYLSKANLSLFMVTHDRYFLEKVTNEILELDAGKIYRY 236

Query: 249 KGNYSSWLEQKTKRMEMEEKTASKRRKTLERELEWVRMAPKARQAKGKARLNSYDKLLNE 308
            GNYS +L++K +R E+E     K +   ++ELEW+R  PKAR  K K R+++++    +
Sbjct: 237 TGNYSYFLDKKAERREVEASEQEKAKSLYKKELEWIRRQPKARGTKAKYRVDAFEATKEK 296

Query: 309 DLKEKEEKLEIFIPNGPRLGNKVIEAKHVAKAYGDKLLFDDLNFMLPPNGIVGVIGPNGA 368
             + KEE+      +  RLG K+IE + + K YGDK +  D ++       +G++GPNGA
Sbjct: 297 AFQRKEEREVALQVSAKRLGGKIIELEKLFKRYGDKRIVSDFSYTFKKGDKIGIVGPNGA 356

Query: 369 GKTTLFRLIMGLETVDKGEFEVGETVKVSYVDQQHKDIDPNKSVYQVISGGNDLIRM-GG 427
           GKTT   ++ G    D G+  +G+T    Y  Q+    D +K +  ++    +++ +  G
Sbjct: 357 GKTTFLNMLTGTLKPDSGDITIGQTTAFGYYRQEEHSFDESKRLIDLVKEVAEVVTLSNG 416

Query: 428 RDINARAYLSRFNFAGADQEKLCGVLSGGERNRLHLAIALKEEGNVLLLDEPTNDIDVNT 487
             I A  +L++F F    Q      LSGGE+ RL L + L +  N L+LDEPTND+D+ T
Sbjct: 417 STITASQFLNQFGFPPKQQHTPISKLSGGEKRRLQLLMVLIKTPNFLILDEPTNDLDIVT 476

Query: 488 LRALEEGLEDFAGCAVVISHDRWFLDRICTHILAFEGDSNVFYFEGSYSEYEE 540
           L  LE+ LE F GC +++SHDR+F+DR+  HI  F+G   +  F G+YS+  E
Sbjct: 477 LNTLEDFLEYFPGCMIIVSHDRYFMDRLVDHIFVFQGGGQIKDFPGNYSDLRE 529



 Score =  115 bits (288), Expect = 5e-30
 Identities = 74/261 (28%), Positives = 136/261 (52%), Gaps = 35/261 (13%)

Query: 332 IEAKHVAKAYGDKLLFDDLNFMLPPNGIVGVIGPNGAGKTTLFRLIMGLETVDKGEFEVG 391
           +  + ++K++GDK LF  ++F +     + ++G NGAGK+TL ++IMG+E  D+GE  + 
Sbjct: 6   LSVEKLSKSFGDKPLFHQISFGIDQGQKIALVGINGAGKSTLMKIIMGMEIPDEGEVAIN 65

Query: 392 ETVKVSYVDQQHKDIDPNKSVYQVISGGND--------------LIRMGGRD-------- 429
           + +K +YV  Q+   + N ++YQ +   +               L    G+D        
Sbjct: 66  QGIKTAYV-HQNPVFEANLTIYQTLFSDSSSEPLKAIEAYQKAMLAAESGKDNADELNGI 124

Query: 430 INARAYLSRFNFAGADQEKL-----------CGVLSGGERNRLHLAIALKEEGNVLLLDE 478
           +     L  ++F    +E L            G LSGG+R R+ LA A+ E+ ++LLLDE
Sbjct: 125 MEKMDRLQAWDFEYQIKEVLGKLGLHDTDLPVGNLSGGQRKRVALAKAILEKPDLLLLDE 184

Query: 479 PTNDIDVNTLRALEEGLEDFAGCAVVISHDRWFLDRICTHILAFEGDSNVFYFEGSYSEY 538
           PTN +D+ T+  LE+ L        +++HDR+FL+++   IL  +    ++ + G+YS +
Sbjct: 185 PTNHLDLKTIEWLEDYLSKANLSLFMVTHDRYFLEKVTNEILELDA-GKIYRYTGNYSYF 243

Query: 539 EENKLKRLGNEEPKRVRYRNL 559
            + K +R   E  ++ + ++L
Sbjct: 244 LDKKAERREVEASEQEKAKSL 264