Pairwise Alignments

Query, 306 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 300 a.a., AraC-type transcription regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 18/247 (7%)

Query: 59  GTMNYGRSLYDYE--KGSMLFIAPGQVM-----GSDDDGSLHQPAGWALMFHPELLRGTS 111
           G+  +  SL ++E   G M+   P Q++      S+  G     +   L   P++    S
Sbjct: 61  GSTRFNISLREFELIPGRMVIALPNQIIEHRQFSSNFRGIFFAVSKSLLESLPKVGNVLS 120

Query: 112 LAHIIKEYSYFSYNANEALHLSEQERKVVIECINNVAEELRHPIDKHSRSLIIDTMK-LL 170
               +K+Y  F  N    LH    E++++ E    + + L++  D++ R +++  M+   
Sbjct: 121 FFFFLKDYPCFDLN----LH----EQEMIKEYHAFIRKRLKNKDDRYRREVVMGLMQGFF 172

Query: 171 LDRCIRFYDRQFITRENANNDLLARFELLLNNYYHSALPTSKGIPTVQYCADQLCLSTNY 230
            + C  F    +    +A     +R E +   +Y S + + +   +V++ ADQLCL+  +
Sbjct: 173 FELCNIF--NSYAPDASAVVKSKSRKEYIFERFYESLVQSYQSERSVKFYADQLCLTPKH 230

Query: 231 FSDLVKKETGMSAIKHIQQKIMDIAKERIMNTQKSISQISDEMGFQYPQHFTRWFKKMEG 290
            S +VK+ +G +  + I + ++  AK  + ++  +I +I+D + F     F ++FK   G
Sbjct: 231 LSGVVKEVSGKTVGEWIDELVILEAKALLNSSSMNIQEIADRLNFANQSFFGKYFKHYTG 290

Query: 291 CTPNEYR 297
            +P EYR
Sbjct: 291 MSPKEYR 297