Pairwise Alignments

Query, 306 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 300 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  321 bits (823), Expect = 1e-92
 Identities = 149/299 (49%), Positives = 221/299 (73%), Gaps = 2/299 (0%)

Query: 3   MGDITRIDTVQQYCDLFEVEALHPLVSVVNCYEV-QPIRHSKKLYNIYAVLLKDTDCGTM 61
           M +IT+I+++ QY  LF +E LHPLV+V++  +  + + + +     Y++ LKD  CG +
Sbjct: 1   MEEITKIESIDQYDQLFGLETLHPLVNVIDFSKATKTVDYYRMNIGFYSLFLKDAKCGDL 60

Query: 62  NYGRSLYDYEKGSMLFIAPGQVMGSDDDGSLH-QPAGWALMFHPELLRGTSLAHIIKEYS 120
            YGR  YDY++G+++ +APGQV+G D+      +     L+FHP+L+RGTSL   IK YS
Sbjct: 61  RYGRKYYDYQEGTVVCMAPGQVIGIDNRKQTPIRTKSIGLLFHPDLIRGTSLGQNIKHYS 120

Query: 121 YFSYNANEALHLSEQERKVVIECINNVAEELRHPIDKHSRSLIIDTMKLLLDRCIRFYDR 180
           +FSY  NEALHLSEQER++V +CI+ +  EL H IDKHS+ LI+  ++LLLD C+RFY+R
Sbjct: 121 FFSYEVNEALHLSEQEREIVTDCIHKIQIELEHAIDKHSKQLIVRNIELLLDYCMRFYER 180

Query: 181 QFITRENANNDLLARFELLLNNYYHSALPTSKGIPTVQYCADQLCLSTNYFSDLVKKETG 240
           QFITR  AN D++ +FE LL+ Y+ +    ++G+P+V+Y AD++CLS+NYF DL+KKETG
Sbjct: 181 QFITRNQANKDIIVKFEQLLDEYFQNQTALTEGLPSVKYFADKVCLSSNYFGDLIKKETG 240

Query: 241 MSAIKHIQQKIMDIAKERIMNTQKSISQISDEMGFQYPQHFTRWFKKMEGCTPNEYRNE 299
            +A ++IQ +I+++AKERI+   +++SQI+ E+GFQYPQHF+R FKK  GCTPNEY+ +
Sbjct: 241 KTAQEYIQHRIIELAKERILEGSQTVSQIAYELGFQYPQHFSRLFKKNVGCTPNEYKQQ 299