Pairwise Alignments

Query, 438 a.a., Na+/solute symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 547 a.a., transporter for D-glucose/D-galactose/D-xylose/methyl-beta-D-galactopyranoside (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 90/421 (21%), Positives = 170/421 (40%), Gaps = 34/421 (8%)

Query: 1   MIGATISGVTFVSVPGMVRGMDMTYMQTVFGFFFGYMIVAHILLPLYYRLNLTSIYGYLG 60
           +I + IS   F+ + G    + +      +      ++VA   LP+Y +  + ++  +L 
Sbjct: 55  LIASNISAEQFIGMSGSGFALGLAISTYEWMAAATLLVVAIFFLPIYLKEGIYTMPQFLN 114

Query: 61  TRIGVNAYRTGSFFFLLSRM-LGTAAKLYLVCLILHTHVFQDMHIPFWVIAVGSVALVWI 119
            R         + F+LL  + +   + LYL  L L T     M +P     +G      +
Sbjct: 115 RRYDGRVRTVMAIFWLLIYVFVNLTSVLYLGALSLETI----MGVPLTYGIIGLALFAMV 170

Query: 120 YTHKSGIKTIVWTDTLQTFCLIAALLFIIYFTIQKLDVG----FDGIVQTIRHSEHSRIF 175
           Y+   G+K + WTD +Q   L+A  L   Y  +  +  G      GI++    S  S I 
Sbjct: 171 YSIYGGLKAVAWTDVVQVVFLVAGGLATTYLALSLVGDGDVWEGIGILRKAAPSHFSMII 230

Query: 176 VFDDWM-------SRQNF-----FKQFFSGIFIV-IVMTGLDQDMMQKNLSCRNLHEAKK 222
              + M       SR  +           G++IV +   G +Q + Q+ L+ ++L EA+ 
Sbjct: 231 EKGEMMIPDGSGGSRDAYLDLPGLSVLIGGMWIVNLNYWGCNQYITQRALAAKSLGEAQT 290

Query: 223 NMYCYGF--SFIPLNFLFLCLGILLIALAGQMQLELPAMNDDILPMFATQGYLGQSVLIL 280
            M   GF    +PL  +   +   +I   G     + +M D +  + A       ++L L
Sbjct: 291 GMVFAGFLKLLMPLIVVIPGIAAYVIVQKGADASFIESMTDPVTGL-AKSDRAYPTLLHL 349

Query: 281 FTIGIIAAAFSNSDSALTAMTTSVC-----IDLLNTDKDTEETARRKRKKVHLS-LSILL 334
              G+   AF+   +A+ +   S+      I  ++  K+       + K+V +  ++ ++
Sbjct: 350 LPPGLKGLAFAALTAAIVSSLASMANSTSTIFTIDIYKEFFNKNVSEGKQVTIGRITAVV 409

Query: 335 AFFICLVEMLNNKSVIDAIYIIASYTYGPLLGMFA---FGLFTRRRTKDRLVPLIAIASP 391
           AF I  +     + +  A   I  YT     G+FA   FG F ++ T +  +    +  P
Sbjct: 410 AFIIAAIVAPQLRQLDQAFQYIQEYTGFVSPGVFAIFIFGFFWKKTTSNAALTAAVLTIP 469

Query: 392 V 392
           +
Sbjct: 470 L 470