Pairwise Alignments

Query, 438 a.a., Na+/solute symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 497 a.a., transporter, SSS family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  101 bits (252), Expect = 5e-26
 Identities = 87/377 (23%), Positives = 166/377 (44%), Gaps = 12/377 (3%)

Query: 6   ISGVTFVSVPGMVRGMDMTYMQTVFGFFFGYMIVAHILLPLYYRLNLTSIYGYLGTRIGV 65
           +S ++F+++PG     +               I     +PLY  +   S Y YL TR G 
Sbjct: 57  VSSISFLALPGNAYLTNWNSFVFSLSIPIAAWIAVKFFVPLYRGVQSESAYYYLETRFGP 116

Query: 66  NAYRTGSFFFLLSRMLGTAAKLYLVCLILHTHVFQDMHIPFWVIAVGSVALVWIYTHKSG 125
            A    S  +LL+++      LYL+ L ++  +  D+     +I V  ++++ IY    G
Sbjct: 117 WARTYASICYLLTQLARMGTILYLLALPMNALLGWDIAT---IIIVTGISVI-IYASMGG 172

Query: 126 IKTIVWTDTLQTFCLIAALLFIIYFTIQKLDVGFDGIVQTIRHSEHSRIFVFDDWMSRQN 185
           I+ ++WTD +Q   LI   L  +   +  +  G   +++  +  +   +  F   M+   
Sbjct: 173 IEAVIWTDAIQGIVLILGALTCLGIILFSMPEGPMQVIEIGQEHDKFSLGSFGLSMTDAT 232

Query: 186 FFKQFFSGIFIVIVMTGLDQDMMQKNLSCRNLHEAKKNMYCYGFSFIPLNFLFLCLGILL 245
           F+     G+FI +   G+DQ+ +Q+ +S +    A K+ +     ++P++ LF  +G  L
Sbjct: 233 FWVILIYGLFINLQNFGVDQNYVQRYMSAKTEKGAIKSTWFGSSLYVPVSLLFFFIGTAL 292

Query: 246 IALAGQMQLELPA------MNDDILPMFATQGYLGQSVLILFTIGIIAAAFSNSDSALTA 299
            A        LP         D I P F   G L + +  L    I AA  S   ++L +
Sbjct: 293 FAYYQVFPDLLPQTLQSKDAADKIFPFFIVNG-LPKGLTGLLIASIFAAGMSTISTSLNS 351

Query: 300 MTTSVCIDLLNTDKDTEETARRKRKKVHLSLSILLAFFICL-VEMLNNKSVIDAIYIIAS 358
             T +  D      +T  + +   + + ++  ++ +  I + + M   KS +DA + ++S
Sbjct: 352 SATVILTDHYKKYINTPPSGKDNFRVLTIAAVVMGSLSIVVSLAMTEVKSALDAWWALSS 411

Query: 359 YTYGPLLGMFAFGLFTR 375
              G +LG+F  G F++
Sbjct: 412 VFSGGVLGLFLLGYFSK 428