Pairwise Alignments

Query, 312 a.a., dihydroorotate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 363 a.a., dihydroorotate dehydrogenase from Agrobacterium fabrum C58

 Score =  168 bits (425), Expect = 2e-46
 Identities = 111/288 (38%), Positives = 151/288 (52%), Gaps = 20/288 (6%)

Query: 34  LRFKNRIGLSAGFDKNAETFDELADFGFGFLEVGTVTPDYQPGNPSSRIFRLVEDESLIS 93
           L F N +G++AG+DKNAE    L   GFGF E+GTVTP  Q GNP  RIFRLVEDE +I+
Sbjct: 52  LVFPNPLGMAAGYDKNAEVPGPLLRLGFGFTEIGTVTPRAQSGNPKPRIFRLVEDEGVIN 111

Query: 94  RTGFNNCGVDVALAHIRRHRKHSYILGVNINKNPLSVGEQIIKDFELVFTRLYESVDYFT 153
           R GFNN G   AL  + + R    I+GVNI  N  S  E  I D+       Y    YFT
Sbjct: 112 RLGFNNEGHAAALERLTQARLRG-IVGVNIGANKDS--EDRIADYVQGIEAFYAVASYFT 168

Query: 154 LNWGSID---------KESFA----KVLENFTTFREAVNKRCSIFIKLPADIDEKELDLV 200
           +N  S +         +ES A     VLE   T  E + KR  IF+K+  D+ E+ LD V
Sbjct: 169 VNISSPNTPGLRDLQARESLAALLTAVLERRKTEAERLGKRIPIFLKIAPDLTEEGLDDV 228

Query: 201 ISLAYKYSIEGFIATGPTMDRSELHQTKTKQLEKIGNGGVSGRGIGKKSQKVVHYLSEHT 260
              A  + ++G I +  T+ R  L         +   GG+SG+ + + S  V+  +    
Sbjct: 229 AEEALAHDLDGLIVSNTTLSREGLRPGP----HRGEAGGLSGKPLFELSTTVLAKMRRRV 284

Query: 261 DRHFLIIGAGGIMTAEDAADMISQGADMVQIYSAFIYSGPSVVHKIGK 308
             +  IIG GG+ +AE A + +  GAD+VQ+YS  +Y GP +   I K
Sbjct: 285 GANLPIIGVGGVSSAETALEKVRAGADLVQLYSCMVYEGPGLPSAIVK 332