Pairwise Alignments

Query, 324 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 309 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  137 bits (345), Expect = 3e-37
 Identities = 92/304 (30%), Positives = 150/304 (49%), Gaps = 6/304 (1%)

Query: 26  KVQRWIMK-EENAEEKEKAS-LEYWNELDTEADSKTYSALE-RVNLRTGYNKEHLENIVL 82
           +V  WI + +ENA +  +   + +  + D  AD +  +  E R+  +    K+  + ++ 
Sbjct: 2   EVNAWISESDENARQLFRMEEIYHLGKFDHYADEQRMANAEKRLYKQLSQEKKKKDKVLH 61

Query: 83  YHKFVRIVAVVIPICLLAGGLLY--YIPSENEQIEISTAYGEQKRLVLPDSSEVWLNAGS 140
            H+++R  A++    L+ GG  Y  Y   E++ +      G  K +VLPD ++VWLN  +
Sbjct: 62  MHRWMRYAAILAVALLMGGGAGYWFYNRPEHQMLVAVANEGIVKEVVLPDGTKVWLNNAA 121

Query: 141 TITYPKTFTKENRVVTLDGEAYFSVRKDDAKPFIVETSQLSVKVLGTKFNVKAYANDANI 200
           T+ YP+ F+++ R V LDGEAYF V K+  KPF VE+  + V+VLGT FN K        
Sbjct: 122 TLKYPREFSEKERNVYLDGEAYFEVTKNRHKPFTVESDAMRVRVLGTTFNFKCDKRCRIA 181

Query: 201 TTTLTSGKVEVSTQSRPPQ-TLKPNEQLTYDKSTSDIEISTVDTVDTNSWVKGKIIFTNA 259
             TL  G++EV       Q  L P ++   ++++  + +  VD      W    I F  A
Sbjct: 182 EATLIEGEIEVKGNKDEGQIVLAPGQRAELNRNSGRLTVKQVDAKLDAVWRDNLIPFNKA 241

Query: 260 TAEEIFRTLERRYDTVIDHSTDFSASRRYTVKFLKDENLDEMLNILGDIIGFSYRQSGNK 319
               I + LER YD  I  S D  + + Y+    K   ++ +L  L + I   Y+  GN 
Sbjct: 242 NIFTITKALERFYDVKIILSPDIRSDKTYSGVLKKKSTIESVLKSLQNSIPIEYKIVGNN 301

Query: 320 IIIT 323
           I I+
Sbjct: 302 IFIS 305