Pairwise Alignments

Query, 324 a.a., putative anti-sigma factor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 332 a.a., sigma factor regulatory protein, FecR/PupR family from Bacteroides ovatus ATCC 8483

 Score =  135 bits (339), Expect = 2e-36
 Identities = 92/294 (31%), Positives = 142/294 (48%), Gaps = 15/294 (5%)

Query: 23  TEEKVQRWIMKEENAEEKEKASLEYWNELDTEADSK--TYSALERVNLRTGYNKEHLENI 80
           T     RW ++ E+  E ++   E W E    A  +  T SA  +V    G      +  
Sbjct: 21  TSSAFGRWFIENESKPEFDQELQEIWKESSQVACDREMTSSAFVKVCEAIGGVAPSPQKS 80

Query: 81  VL---YHKFVRIVAVVIPICLLAGGLLYYIPSENEQ---IEISTAYGEQKRLVLPDSSEV 134
                 H  +R+ A++  I LL   L  Y+ ++  Q   IE+   YG++K ++LPD S+V
Sbjct: 81  TFTRTIHYLIRVAAILF-IPLLGATLYLYLDNKESQVNWIEVYAEYGQKKEVILPDQSKV 139

Query: 135 WLNAGSTITYPKTFTKENRVVTLDGEAYFSVRKDDAKPFIVETSQLSVKVLGTKFNVKAY 194
           WLN+G+ I YP+ FT+  R + + GE +  V KD  +PFIV+T  LS+KV GT+FNV++Y
Sbjct: 140 WLNSGTHIIYPEWFTQV-RQIFVSGETFLEVTKDPERPFIVDTKDLSIKVHGTRFNVRSY 198

Query: 195 ANDANITTTLTSGKVEVSTQSRPPQT---LKPNEQLTYDKSTSDIEISTVDTVDTNSWVK 251
             D     TL  G + +  +    Q    L P E+   DK    +++   D     SW  
Sbjct: 199 TEDKGTEATLLEGSISLLVKGDLNQQDIFLVPGEKAILDK--KQVKLEKFDVDGYQSWRN 256

Query: 252 GKIIFTNATAEEIFRTLERRYDTVIDHSTDFSASRRYTVKFLKDENLDEMLNIL 305
           G+  F + T +EI   L+R ++  I           + V F +  +LDEML  L
Sbjct: 257 GQYTFRDKTLQEIITELQRLFNVQIVIRDKALLKEIFFVTFAQGLSLDEMLEAL 310