Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 378 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 80/372 (21%), Positives = 164/372 (44%), Gaps = 23/372 (6%)

Query: 13  VLLREWRRMTSRRLYLCVCIILPLFTLFFMATIFG---NGQMENIPIGIVDQDNTASSRA 69
           ++L+E+ ++   R+   + + LP+  L     +FG   N   +++   ++  D +  SR+
Sbjct: 13  IVLKEFIQLRRDRITFGMIVGLPIMQL----ALFGFAINTDPKHLHTAVIIGDESQFSRS 68

Query: 70  ITRNISAVPTFKVTRHFVNEEAARKAVQKKEIYGYLSIPPKFEQDAISGKNATLSYYYHY 129
               +     F+V     N+EA R+A+ + ++   +SIP  F +  + G++ +L      
Sbjct: 69  FVAAMKNSDYFRVVDTLPNDEAGRQALARGDVTFVVSIPVDFSRRLLRGEHPSLLV---- 124

Query: 130 ALLSVGGELMAAFETSL-APVSLSPIVMQAVA---LGVEQDKITTFLLPVQASNHPIYNP 185
                  E  A   T+  AP++  P ++Q+VA   +    +++T    P     H +YNP
Sbjct: 125 -------EADATDPTATQAPLAALPGLVQSVADKDMKGPLERLTGKPAPFDVEIHRLYNP 177

Query: 186 SLDYSVYLSQPFFFVLFQVLILLITVYAVGIEIKFRTADEWLFVAKGNMVTAVLGKLLPY 245
                  +       +  + ++++T  A+  E + R   E L       +  + GKL+PY
Sbjct: 178 EGITQYNVVPGLMGTILTLTMVMMTGLAMTRE-RERGTMENLLATPVLPLEVIAGKLVPY 236

Query: 246 TIIFILIGWLANYVMFGILHIPFQGSWLLMNMLTALFVVATQALGLFLFSLFPAISLIIS 305
             I ++   +       + ++PF GS + + +   LF+ A   +G+ L S+       + 
Sbjct: 237 IAIGLVQSSIILAAARFVFNVPFVGSLVALYVAALLFIAANLTVGITLSSIAQNQLQAMQ 296

Query: 306 IVSMVGSLGATLSGVTFPVPNMYPLVRDASYLFPVRHFTEMMQNMLYGGSGFIHLWPSAV 365
           +          LSG  FP   M    +    L P+ +F  +++ +L  G+G+  LWPS  
Sbjct: 297 LTIFYFLPSLLLSGFMFPFAGMPVWAQWIGNLLPLTYFNRLVRGILLKGNGWADLWPSVW 356

Query: 366 ILCIFPLLALVL 377
            + IF ++ + +
Sbjct: 357 PVAIFTVVVMAI 368