Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 371 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

 Score =  119 bits (298), Expect = 1e-31
 Identities = 83/360 (23%), Positives = 161/360 (44%), Gaps = 6/360 (1%)

Query: 14  LLREWRRMTSRRLYLCVCIILPLFTLFFMATIFGNGQMENIPIGIVDQDNTASSRAITRN 73
           ++REWR +   R  + + + LPL T+           +  +PIG++D DN+  SR   R 
Sbjct: 1   MIREWRALWRDRWGMALALWLPLITMLIAWWTLSGAIVRELPIGLIDLDNSTMSRQFARE 60

Query: 74  ISAVPTFKVTRHFVNEEAARKAVQKKEIYGYLSIPPKFEQDAISGKNATLSYYYHYALLS 133
           + A P+F +   F        +++  EIY  + IP  FE+D   G + T++ + +   + 
Sbjct: 61  LHASPSFNLNHQFSTVAEGATSLRGGEIYALVVIPRHFERDIRQGTSPTITAWNNGQFVL 120

Query: 134 VGGELMAAFETSLAPVSLSPIVMQAVALGVEQDKITTFLLPVQASNHPIYNPSLDYSVYL 193
           +   + ++        +    V++A+A G    +     +P+      ++N + +Y+ +L
Sbjct: 121 IAKVINSSLALVAGTFNGQIAVVRALAQGAAIPEAKGLAVPIGGQITALFNQNSNYAQFL 180

Query: 194 SQPFFFVLFQVLILLITVYAVGIEIKFRTADEWLFVAKGNMVTAVLGKLLPYTIIFILIG 253
                  ++ +L+ L  +  +  E   R    W    +     A+  K L + +I    G
Sbjct: 181 LNAIIPSIWSILLALYGLNTLARE--DRRGTRW----EPENRAAIGAKFLTHWLIGWAWG 234

Query: 254 WLANYVMFGILHIPFQGSWLLMNMLTALFVVATQALGLFLFSLFPAISLIISIVSMVGSL 313
            + +Y ++ +L+ P  GS LL+ +   +   A  ALG+  ++L    +  +SIV  + + 
Sbjct: 235 GVWSYALYSLLNYPLNGSALLLFVSIGVTAGACVALGMAFYALIRDPARAVSIVGALMAP 294

Query: 314 GATLSGVTFPVPNMYPLVRDASYLFPVRHFTEMMQNMLYGGSGFIHLWPSAVILCIFPLL 373
           G    G+TFP   M         L PV H+ ++   +   G+G I + P+   L +F LL
Sbjct: 295 GLAFMGITFPAAAMETFATFWRQLLPVAHYGDIAIAITSYGAGLIQIAPALAALALFWLL 354