Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 378 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 80/368 (21%), Positives = 147/368 (39%), Gaps = 22/368 (5%)

Query: 15  LREWRRMTSRRLYLCVCIILPLFTLFFMATIFGNGQMENIPIGIVDQDNTASSRAITRNI 74
           L+   R    R  L + +IL +    F AT+     + N  I I  +DN   +  +T+  
Sbjct: 13  LQSLLRDPQTRSILVLPVILQVSLFPFAATL----DVTNATIAIYSEDNGPHAIELTQRF 68

Query: 75  SAVPTFKVTRHFVNEEAARKAVQKKEIYGYLSIPPKFEQDAISGKNATLSYYYHYALLSV 134
           +   +F       + +     +  +     L  PP+F +D  SG + +L        L +
Sbjct: 69  AKAKSFSHVLMLHHSQDIAPTLDNQRALLILRFPPQFSRDIASGNSTSLQ-------LIL 121

Query: 135 GGELMAAFETSLAPVSLSPIVMQAVALGVEQDKITTFLLPVQASNHPI-----YNPSLDY 189
            G    + + +   V       Q   L     +  T       +N  +     YNP+LDY
Sbjct: 122 DGRRSNSAQIAANDVQHIVRDYQLELLAARPAQNATTQNHSNPNNSELVVRHWYNPNLDY 181

Query: 190 SVYLSQPFFFVLFQVLILLITVYAVGIEIKFRTADEWLFVAKGNMVTAVLGKLLPYTIIF 249
             ++      ++  + +L++T  +V  E +  T ++ L V+  +     +GK +P  I+ 
Sbjct: 182 KWFVVPSLIAMITTIGVLIVTALSVAREREQGTLEQ-LLVSPLSTSQIFIGKAIPALIVA 240

Query: 250 ILIGWLANYVMFGILHIPFQGSWLLMNMLTALFVVATQALGLFLFSLFPAISLIISIVSM 309
                +       I HIPF GS LL      ++ ++    GL + SL          V +
Sbjct: 241 TFQATIVLLAGILIYHIPFAGSLLLFYTTMLIYGLSLVGFGLLISSLCSTQQQAFIGVFV 300

Query: 310 VGSLGATLSGVTFPVPNMYPLVRDASYLFPVRHFTEMMQNMLYGGSGFIHLWPSAVILCI 369
                  LSG   PV NM   ++  +++ P+RHFT++ + +    + F  +W S     +
Sbjct: 301 FLMPAILLSGYVSPVENMPIWLQHITWVNPIRHFTDITKQIYLKDADFSIIWGS-----L 355

Query: 370 FPLLALVL 377
           +PL  + L
Sbjct: 356 WPLFIITL 363