Pairwise Alignments

Query, 394 a.a., conserved hypothetical protein, putative transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 391 a.a., ABC transporter permease from Pectobacterium carotovorum WPP14

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 80/353 (22%), Positives = 155/353 (43%), Gaps = 27/353 (7%)

Query: 11  RSVLLREWRRMTSRRLYLCVCIILPLFTLFFMATIFGNG---QMENIPIGIVDQDNTASS 67
           R++ L+E R++        +  ++PL  LF    IFG G       + +GI+ +  +  +
Sbjct: 26  RALCLKETRQILRDPSSGLIAFVIPLLLLF----IFGYGINLDSSRLHVGILMEQQSEDA 81

Query: 68  RAITRNISAVPTFKVTRHFVNEEAARKAVQKKEIYGYLSIPPKF-EQDAISGKNATLSYY 126
           R +    +A P    T    N +   + +Q   I G + IP  F E+ A  G  A +   
Sbjct: 82  RDLANTFAASPFIAPTISN-NRQHLIQQMQAGSIRGLIVIPTDFAERLARPGDRAPIQ-- 138

Query: 127 YHYALLSVGGELMAAFETSLAPVSLSPIVMQAVALGVEQDKITTFLLPVQASNHPIYNPS 186
               +++ G E   A         +  +  Q  A    +D+  TF   ++  +   +NP+
Sbjct: 139 ----VITDGSEPNTANFVQGYAEGIWLLWQQQRA----EDRGYTFEQLIEVQSRYWFNPA 190

Query: 187 LDYSVYLSQPFFFVLFQVLILLITVYAVGIEIKFRTADEWLFVAKGNMVTAVLGKLLPYT 246
                ++      ++  V+  ++T   +  E + R   E L   +      +L KL+PY 
Sbjct: 191 AISQHFIIPGAITIIMTVIGAILTSLVIAREWE-RGTMEALLSTQVTRAELLLSKLIPYY 249

Query: 247 IIFILIGWLANYVMFGILHIPFQGSWLLMNMLTALFVVATQALGLFLFSL----FPAISL 302
            + ++   L   V   I+ +P++GS +L+ ++++LF+ +T  +GL + +L    F A  +
Sbjct: 250 FLGMIAMTLCILVSTFIMQVPYRGSLILLFVISSLFLASTLGMGLLISTLTRNQFNAAMV 309

Query: 303 IISIVSMVGSLGATLSGVTFPVPNMYPLVRDASYLFPVRHFTEMMQNMLYGGS 355
            ++   +   +   LSG  F + +M   VR  SYL P R+F   +Q +   G+
Sbjct: 310 ALNAAFLPAIM---LSGFIFEIDSMPEFVRGVSYLIPARYFVSTLQTLFLAGN 359