Pairwise Alignments

Query, 371 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 368 a.a., agmatine deiminase from Pseudomonas simiae WCS417

 Score =  170 bits (430), Expect = 7e-47
 Identities = 107/356 (30%), Positives = 178/356 (50%), Gaps = 30/356 (8%)

Query: 36  LPAEWHLQSGIQLTWPHAGTDWAYMLKEVQECFVNIAREIAKRELLLIVTPEPEEVKKQI 95
           +PAEW  Q+ + + WP    +W    K  Q   V +A+ IA+ E + +     +    + 
Sbjct: 15  MPAEWAPQTQVWMIWPERPDNWRLGGKPAQAAHVAVAKAIARFEPVTVAVSAGQYENAR- 73

Query: 96  VATVNMDNVRFLRCETNDTWARDHGAITMI-DTGNPSLLDFTFNGWG-----LKFASELD 149
            A +++ N+R +   ++D W RD G   +I D+G    +++ FN WG     L      D
Sbjct: 74  -ARLDVPNIRVVEMSSDDAWVRDTGPTFVINDSGEVRGVNWDFNAWGGFDGGLYSPWNRD 132

Query: 150 NLITGQAVKAGALKGQYIDCLDFVLEGGSIESDGMGTLLTTTECLLSPHRNGKLNQVEIE 209
           + + G+ ++         +   FVLEGGSI  DG GTL+TT ECLL+ +RN  L++ EIE
Sbjct: 133 SQVGGKILEIERTPRYRTE--GFVLEGGSIHVDGEGTLITTEECLLNRNRNPHLDRAEIE 190

Query: 210 EYLKSTFHLQKVLWLDHGYLAGDDTDSHIDTLARFCSTDTIAYVKCDNTEDEHYEALHAM 269
             L +   + K++WL  G L  D+TD H+D    +     +     D+ +D +Y   HA 
Sbjct: 191 AVLSANLAVDKIIWLPDG-LFNDETDGHVDNFCCYVRPGEVLLAWTDDPQDPNYARCHAA 249

Query: 270 EEQLKTFRTLAGEPYRLLALPMADKV---EEDGE---------------RLPATYANFLI 311
            + L++     G  + +  +P+   +   EE+ E               RL  +Y NFLI
Sbjct: 250 MDVLQSSTDAQGRSFTVHKMPIPGPLYATEEECEGVDPVDGTQERNPTVRLAGSYVNFLI 309

Query: 312 MNDAILYPTYQQPDNDRKAGEVLQQAFPKHQVIGIDCRALIKQHGSLHCVTMQYPS 367
           +N  I+ P++  P  D +A  +LQ  FP+H+V+ +  R L+   G++HC+T Q P+
Sbjct: 310 VNGGIIAPSFDDP-LDSQAKAILQDLFPQHEVVMVPGRELLLGGGNIHCLTQQQPA 364