Pairwise Alignments

Query, 416 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 415 a.a., ABC transporter permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  268 bits (686), Expect = 2e-76
 Identities = 146/416 (35%), Positives = 228/416 (54%), Gaps = 1/416 (0%)

Query: 1   MDIKLEKKPWYIRYRYYLIGGLLFAAFLIYVIVLSLGPRKLRIDAENIQIAEVKEDNFME 60
           MD  +E+KP   R   Y IGG+     +I   +       + ++ + + IA VK+  F +
Sbjct: 1   MDTPVERKPGINRKHLYTIGGVALGIAVILYFIFRDTASSMTVEKDRLTIATVKQAEFND 60

Query: 61  YVDVEGLIQPILTIKINTREAGSVESIVGEEGSLLYQGDTIIVLSNPDLLRSIEDQRDEW 120
           Y+ V G + P   I ++  E G VE  + EEG+++  GD I+ LSNP L   I     + 
Sbjct: 61  YIRVIGQVMPSRIIYMDAIEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 121 EKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLKKSIALDREEFQMGVKSKAQLQVAE 180
             Q    +   I MEQ+ L LKQ+ +  N EL   K+     R   +  + ++   + AE
Sbjct: 121 AYQENELRNTRISMEQERLQLKQERIGLNKELTLKKRRYEQYRRLVEEQLIAREDFRQAE 180

Query: 181 DEYNYKLKNAALQQESLRHDSAVTMIRKELIRNDRERERKKYERTHERLNNLVVTAPIKG 240
           +EY    +  A+  E +R D+     +   +  +    ++      ERL NL + API G
Sbjct: 181 EEYEAAKEQLAVIDERIRQDNIFRESQISSLDENIRNMKRSLTLVRERLENLKIKAPIDG 240

Query: 241 QLSFVRVTPGQQVSSGESIAEIKVLDQYKIHTSLSEYYIDRITTGLPATVNYQGKKYPLK 300
           Q+  +    GQ +S+GE I +I +    K+   + E+Y++R+  GLPA     G  Y L+
Sbjct: 241 QVGNLNAQVGQSISAGEHIGQI-ITPDLKVQAQIDEHYVERVLPGLPADFTRDGGTYKLE 299

Query: 301 ITKVVPEVKDRMFDVDLVFTGDMPDNVRVGKSFRVQIELGQPERALIIPRGNFYQSTGGQ 360
           +TK  PEVK+  F  DL F  + P+N+R G+++ + ++LG P +A+++PRG F+Q TGG+
Sbjct: 300 VTKPYPEVKEGQFRTDLAFISERPENIRAGQTYHINLQLGDPAQAILVPRGGFFQITGGR 359

Query: 361 WIYKVNASKTKAIRVPLSIGRQNPQQYEITEGLQTGDWVITTGYDTFGDAEELILK 416
           W+Y V+ S   A R P+ IGRQNPQ YE+TEGL +G+ VI +GY+ FGD E+LILK
Sbjct: 360 WMYIVDESGKFATRRPVKIGRQNPQYYEVTEGLSSGEKVIISGYELFGDNEKLILK 415