Pairwise Alignments

Query, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 181 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase from Pseudomonas simiae WCS417

 Score =  186 bits (471), Expect = 3e-52
 Identities = 100/182 (54%), Positives = 122/182 (67%), Gaps = 3/182 (1%)

Query: 1   MNYIQTEIDGVWLIEPNVYSDERGYFMEAFKKEEFEAKIG-PVDFVQDNESKSSFGVLRG 59
           MN I+T +  V +IEP V+ DERG+F E+F    FE   G    FVQDN S+S  GVLRG
Sbjct: 1   MNVIETSLPDVLIIEPKVFGDERGFFYESFNARAFEEATGLKRQFVQDNHSRSQKGVLRG 60

Query: 60  LHYQKGEYSQAKLVRVLKGKVLDVAVDLRRSSPTFGKHVSALLSEENKRQFFIPRGFAHG 119
           LHYQ  E++Q KLVRV  G+VLDVAVD+RRSSP FG+ V   LS +N RQ ++P GFAHG
Sbjct: 61  LHYQL-EHTQGKLVRVTAGEVLDVAVDIRRSSPNFGQWVGVRLSAQNHRQLWVPEGFAHG 119

Query: 120 FVVLSEEAVFMYKVDNKYAPQAEASIVYNDETLGIDWMLGESQMLLSPKDKEGMAFRDAV 179
           FVVLSE A F+YK  + Y P AE  I++ND TL IDW L E+   LS KD+ G    +A 
Sbjct: 120 FVVLSEHAEFLYKTTDYYQPSAERCILWNDPTLAIDWELSEAPQ-LSAKDQAGKPLMEAD 178

Query: 180 YF 181
            F
Sbjct: 179 VF 180