Pairwise Alignments

Query, 206 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 213 a.a., putative DNA-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  139 bits (349), Expect = 5e-38
 Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 2/205 (0%)

Query: 1   MNALYDFFLTPQPKDS-NKTRYHARLVVRDTITLEDIAETIESRSSLRQSDVIGSFIEFA 59
           M   ++ + TP PK+  NKTRYHAR V  +T+  E +A  I  RS+LR SD+I +  E  
Sbjct: 1   MAVQFELYKTPMPKEKKNKTRYHARPVSFETVNTEKLAYRIHDRSTLRVSDIISTLEELK 60

Query: 60  NVFKQELSNGNSIHIPGVGSFRIKAE-SPEVRSPKEIRAENIHCSGIVFTPEKDLLRELK 118
           N   Q L  G  +H+ G+G F++      E+R+PK+ R   +    I F  +K+L  EL 
Sbjct: 61  NEVAQCLLEGKKVHVDGLGFFQVTLSCEEEIRNPKDKRVHRVKLKAIKFKADKELKGELC 120

Query: 119 ATTFEKVSETRRSQELSDIEIDGRLAEFFKDNSCITTQQLCSLCGLRKATALRRLQKRVD 178
              F++      S  LS++EID +L E+F +N  IT +    LCG+ + TA R +++ + 
Sbjct: 121 HMKFQRSKIRPHSANLSEVEIDMKLTEYFAENQIITRKDFQYLCGMTQITAYRHIKRLMA 180

Query: 179 EGKLTHPGYIRSPFYFPVPGWFGVS 203
           E KL + G I  P Y PVPG + VS
Sbjct: 181 EKKLQNKGTIYQPIYTPVPGNYRVS 205