Pairwise Alignments

Query, 670 a.a., 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 728 a.a., 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  200 bits (508), Expect = 2e-55
 Identities = 177/638 (27%), Positives = 287/638 (44%), Gaps = 77/638 (12%)

Query: 61  GWTFREWAPNATHIYMVGTFNNWEEKAAYKLKKLKNGNWEINLPADAIHHGDLYKLNVYW 120
           G  F  WAPNA  + +VG FN W+ +      + ++G WE+ +P    H+G LYK  +  
Sbjct: 137 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPG--AHNGQLYKFELL- 193

Query: 121 DGGQGERIPAWATRVVQDEQTKIFSAQVWAPEK--PYKFKKKTFKPTTNPLLIYECHIGM 178
           D     RI A         + +  S     PEK  P + ++K       P+ IYE H+G 
Sbjct: 194 DANGNLRIKADPYAFEAQMRPETASMICGLPEKVTPGEERQKA-NQFDAPISIYEVHLGS 252

Query: 179 AQQEEKVG---TYNEFREKTLPRIAQEGYNCIQIMAIQEHPYYGSFGYHVSSFFAASSRF 235
            ++        +Y E  ++ +P     G+  ++++ + EHP+ GS+GY  +  +A + RF
Sbjct: 253 WRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPVNEHPFDGSWGYQPTGLYAPTRRF 312

Query: 236 GTPDELKALIDAAHEMGIAVIMDIVHSHAVKNEVEGLGNFAGDPNQYFYPAPRR-EHPAW 294
           GT D+ +  I+AAH  G+ VI+D V  H   +E   L  F G  + Y +  PR   H  W
Sbjct: 313 GTRDDFRYFINAAHAAGLNVILDWVPGHFPSDEF-SLAEFDG-THLYEHSDPREGYHQDW 370

Query: 295 DSLCFDYGKNEVIHFLLSNCKYWLEEYKFDGFRFDGVTSMLY--YSHGLGEAFCNYGDYF 352
           ++L ++YG+ EV ++L+ N  YW+E +  D  R D V SM+Y  YS   GE   N    F
Sbjct: 371 NTLIYNYGRREVSNYLVGNALYWMERFGIDALRVDAVASMIYRDYSRKEGEWIPN---EF 427

Query: 353 NGHQDGNAICYLTLANELIHQVNPKAISIAEEVSGMPGLAAKVEDGGYGFDYRMAM---- 408
            G ++  AI +L   N +I +  P A+S+AEE +   G+    E GG GF Y+  +    
Sbjct: 428 GGRENLEAIEFLRNTNRIIGEQVPGAVSMAEESTDFSGVTRPPETGGLGFWYKWNLGWMH 487

Query: 409 NIPDYW-IKTIKEKIDEDWKPSSMFWEVTNRRQDEKTISYAESHDQALVGDKTIIFRLID 467
           +  DY  +  +  +   D     M +  T      +      SHD+ + G K+I+ R+  
Sbjct: 488 DTLDYMKLDPVYRQYHHDKLTFGMLYNHT------ENFVLPLSHDEVVHGKKSILDRM-- 539

Query: 468 ADMYWHMQKGDENYVVNRGIALHKMIRLLT----SSTINGGYLNFMGNEFGHPEWIDFPR 523
                             G A  K   L           G  L FMGNEF          
Sbjct: 540 -----------------PGDAWQKFANLRAYYGWMWAFPGKKLLFMGNEFA--------- 573

Query: 524 EGNGWSCKYARRQWDLVDNKNLAYHYMGDFDAEMLKVIKSVK-----DFQATPVQEIWHN 578
           +G  W+   A   W L++  +  +H +     ++    +  K     DF A   + +  +
Sbjct: 574 QGREWN-HDASLDWHLLEGGDNWHHGVQRLVRDLNHTYRHHKALHELDFDAYGFEWLVVD 632

Query: 579 DGDQ-VLAYGRKD-----LIFVFNFNPKQSFVDYGFLVS-PGAYEVILNTDNVAFGGNGL 631
           D ++ VL + R+D     +I   NF P     DY F ++ PG +  ILNTD++ + G+  
Sbjct: 633 DNERSVLIFVRRDKAGNEIIVASNFTPVPRH-DYRFGINQPGRWREILNTDSMHYHGSNT 691

Query: 632 ADDSVVHFTIADPLYKKEKKEWLKLYIPARTAVVLRKK 669
            +  VVH   +D +    ++  L L +P    + L ++
Sbjct: 692 GNGGVVH---SDEIESHGRQHSLNLTLPPLATIWLMRE 726



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 6/50 (12%)

Query: 46 FASGYLYFGLHRTPKGWTFREWAPNATHIYMVGTFNNWEEKAAYKLKKLK 95
          FA  +   G+H+T  G   R   P+AT ++++      E K   K+ KL+
Sbjct: 18 FADPFSVLGMHQTQAGLEVRALLPDATDVWVI------EPKTGRKVGKLE 61