Pairwise Alignments

Query, 682 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 434 a.a., Uncharacterized protein conserved in bacteria from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 620 REFYPEGALKSEAEVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKYYTEEGEFERK 679
           + ++P G LK+      G +HG Y+  +  G + + G Y  N+   TWKYY EEG   + 
Sbjct: 364 KSYHPNGQLKTLTTYDAGWKHGPYQSVNPQGTVLVEGSYWYNKKSNTWKYYDEEGTLIKT 423

Query: 680 EKF 682
           EK+
Sbjct: 424 EKY 426



 Score = 46.2 bits (108), Expect = 3e-09
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 2/110 (1%)

Query: 575 YEPEEVVAVVSDEEDQDMDEEAVTEKEQMSEL--KRFYIEKFEGNVLREFYPEGALKSEA 632
           Y PE+   + +   + ++ E      +Q   L  K  + E      L  ++PEGALK   
Sbjct: 77  YYPEQGDTLKTVAYENNLREGPALSYDQSGNLIQKAAFQEDMMEGTLETYFPEGALKMTG 136

Query: 633 EVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKYYTEEGEFERKEKF 682
                K  G++ EY+ +G ++    Y     +G++K + E G+ +  E +
Sbjct: 137 PFLHNKPQGKHTEYYSSGTVRSEANYEAGVLEGSFKSFYENGQLQSHEHY 186



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 599 EKEQMSELKRFYIEKFEGNVLREFYPEGALKSEAEVKEGKRHGRYREYHENGKLKLRGKY 658
           E  Q+   + +   + +G V   +YP G LK +A   +G +   +  Y E+G++  +G Y
Sbjct: 176 ENGQLQSHEHYEAGQLDGQVTA-YYPNGQLKEQAYYDKGVQDDVFTAYFEDGQIAKKGNY 234

Query: 659 SNNQPKGTWKYYTEEG 674
            N +P G +K +   G
Sbjct: 235 KNGRPDGVFKTFYPSG 250



 Score = 38.9 bits (89), Expect = 5e-07
 Identities = 17/59 (28%), Positives = 30/59 (50%)

Query: 621 EFYPEGALKSEAEVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKYYTEEGEFERK 679
           E+Y  G ++SEA  + G   G ++ ++ENG+L+    Y   Q  G    Y   G+ + +
Sbjct: 149 EYYSSGTVRSEANYEAGVLEGSFKSFYENGQLQSHEHYEAGQLDGQVTAYYPNGQLKEQ 207



 Score = 38.5 bits (88), Expect = 7e-07
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 614 FEGNVL----REFYPEGALKSEAEVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKY 669
           +E  VL    + FY  G L+S    + G+  G+   Y+ NG+LK +  Y        +  
Sbjct: 162 YEAGVLEGSFKSFYENGQLQSHEHYEAGQLDGQVTAYYPNGQLKEQAYYDKGVQDDVFTA 221

Query: 670 YTEEGEFERKEKF 682
           Y E+G+  +K  +
Sbjct: 222 YFEDGQIAKKGNY 234



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 614 FEGNV---LREFYPEGALK-SEAEVKEGKR-HGRYREYHENGKLKLRGKYSNNQPKGTW- 667
           F GN    +R +Y E   K  E    E  +  G YR Y+E+G L+L G + N + +G + 
Sbjct: 16  FYGNAQDTVRTYYDEEQSKLMEIYFSENDQIEGTYRRYYEDGSLQLEGMFVNGKREGVFV 75

Query: 668 KYYTEEGE 675
            YY E+G+
Sbjct: 76  HYYPEQGD 83



 Score = 32.3 bits (72), Expect = 5e-05
 Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 13/118 (11%)

Query: 578 EEVVAVVSDEEDQDMDEEAVTEKEQMSELKRFYIE----KFEG--------NVLREFYPE 625
           ++ V    DEE   + E   +E +Q+    R Y E    + EG         V   +YPE
Sbjct: 21  QDTVRTYYDEEQSKLMEIYFSENDQIEGTYRRYYEDGSLQLEGMFVNGKREGVFVHYYPE 80

Query: 626 -GALKSEAEVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKYYTEEGEFERKEKF 682
            G        +   R G    Y ++G L  +  +  +  +GT + Y  EG  +    F
Sbjct: 81  QGDTLKTVAYENNLREGPALSYDQSGNLIQKAAFQEDMMEGTLETYFPEGALKMTGPF 138



 Score = 32.3 bits (72), Expect = 5e-05
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 618 VLREFYPEGALKSEAEVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKYYTEEGEFE 677
           V + FYP G  K+  E K+G   G    Y+ + K      Y  +  K    +Y E G+ +
Sbjct: 242 VFKTFYPSGTTKALIEYKKGTPVGNQILYYPSAKKSEVIAYDRDGIKQQHIFYHENGQIQ 301

Query: 678 RK 679
           +K
Sbjct: 302 KK 303



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 12/62 (19%), Positives = 28/62 (45%)

Query: 609 FYIEKFEGNVLREFYPEGALKSEAEVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWK 668
           +Y +  + +V   ++ +G +  +   K G+  G ++ ++ +G  K   +Y    P G   
Sbjct: 209 YYDKGVQDDVFTAYFEDGQIAKKGNYKNGRPDGVFKTFYPSGTTKALIEYKKGTPVGNQI 268

Query: 669 YY 670
            Y
Sbjct: 269 LY 270



 Score = 28.1 bits (61), Expect = 9e-04
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 623 YPEGALKSEA-EVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKYYTEEGEFE 677
           Y E   K E    + G+  G YR + + G L L  ++   +P G  K Y   G+ +
Sbjct: 318 YDEDGRKQEVIPYQYGQWDGTYRRFDQAGNLILEQEFRKGKPYGEEKSYHPNGQLK 373



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 12/61 (19%), Positives = 31/61 (50%)

Query: 622 FYPEGALKSEAEVKEGKRHGRYREYHENGKLKLRGKYSNNQPKGTWKYYTEEGEFERKEK 681
           ++  G ++ + ++ +G   G+   Y E+G+ +    Y   Q  GT++ + + G    +++
Sbjct: 294 YHENGQIQKKVQLVQGVPQGQVIAYDEDGRKQEVIPYQYGQWDGTYRRFDQAGNLILEQE 353

Query: 682 F 682
           F
Sbjct: 354 F 354