Pairwise Alignments

Query, 338 a.a., putative mRNA-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 310 a.a., NAD-dependent dehydratase from Pseudomonas simiae WCS417

 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 24/269 (8%)

Query: 2   KALFIGGTGTISTDVVELAQQRGWEITLLNRGSK----KLPEG---VGSIIADIHDEEAV 54
           + L  GG G I + +VE    +G++I +L+  S      LP     +  +I D+ D   V
Sbjct: 5   RILVTGGAGFIGSHLVEALLGKGYKIRVLDNLSTGKVANLPVAHPDLELMIGDVADSAVV 64

Query: 55  AKAIADESYDVVAQFIAYTAEDVERDIR---------------LFRNKTKQYIFISSASA 99
            +A+AD S  V    +A     V+  +                + +    + +F SSA+ 
Sbjct: 65  EQAMADCSAVVHLAAVASVQASVDDPVATHQANFVGTLNVCQSMLKAGVTRVVFASSAAT 124

Query: 100 YQKPLADYRITESTPLVNPYWQYSRHKIAAEEVLMTAYRTTGFPITIVRPSHTYNGTKPP 159
           Y        I E TP  +P   Y+  K+A+E  L    R  G    I R  + +   + P
Sbjct: 125 YGNNGEGTAIAEDTPK-SPLTPYASDKLASEYYLDFYRREHGLEPVIFRFFNIFGPRQDP 183

Query: 160 VSLHGNKGNWQILKRILDGKPVIIPGDGSSLWTLTHSKDFAKGYVGLMANPHAIGNAFHI 219
            S +    +    +R L GKP+ + GDG       + +D     V  +        A ++
Sbjct: 184 SSPYSGVISI-FTERALAGKPITVFGDGEQTRDFVYVQDLVSILVQAVETREPAPEAINV 242

Query: 220 TTDESMTWNQIYQTIADALGKPLNALHVA 248
               S + N +   + +A G  LN  + A
Sbjct: 243 GLSRSTSLNDLIAELGNATGTALNVTYQA 271