Pairwise Alignments

Query, 245 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 225 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 4e-49
 Identities = 91/222 (40%), Positives = 137/222 (61%), Gaps = 2/222 (0%)

Query: 24  KILLAEDEVNIASFIERGLKEFGHSVTVCHDGNTGWRILQEEPFDLVILDIIMPKINGLE 83
           ++L+ EDE   A ++ RGL E G++V V  +G  G  +  E  + +++LD+++P ++G  
Sbjct: 2   RVLIIEDEEKTADYLHRGLTEQGYTVDVAREGVEGLHLALENDYAVIVLDVMLPGLDGFG 61

Query: 84  LCHLYRQMFGYQAPVIMLTALGTTEDIVKGLDAGADDYLVKPFSFQELEARIKALLRRNK 143
           +    R     Q PVIMLTA    ED ++GL  GADDYL KPFSF EL AR++AL RR+ 
Sbjct: 62  VLRALRAR--KQTPVIMLTARERVEDRIRGLREGADDYLGKPFSFLELVARLQALTRRSG 119

Query: 144 ETVTNQLTCDNLVLDCNTRRAKRGDADIDLTVKEYRLLEYFMTHQGVALSRITLLKDVWD 203
                Q+T  +L +D  +R+A R    +DLT KE+ LL      QG  LS+  + + VWD
Sbjct: 120 GHEPVQVTVADLWIDLISRKASRNGVRLDLTAKEFSLLSVLARRQGEILSKTAIAEMVWD 179

Query: 204 KNFDTNTNIVDVYVNYLRVKIDRDFDKKLIHTVVGLGYIMNA 245
            NFD++ N+V+V +  LR K+D  FD KL+HT+ G+GY++ +
Sbjct: 180 INFDSDANVVEVAIKRLRAKLDGPFDTKLLHTIRGMGYVLES 221