Pairwise Alignments

Query, 1041 a.a., cation efflux system protein czcA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1470 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  675 bits (1742), Expect = 0.0
 Identities = 375/1049 (35%), Positives = 622/1049 (59%), Gaps = 29/1049 (2%)

Query: 5    IDNIVAFSLKNKFFIFFCTVIAVIAGAVSFKHTPIDAFPDVTNTKVTIITQWAGRSAEEV 64
            I+ I++FS+KNKF +   T+  +  G  S     + + PD+TN +V ++T     + E++
Sbjct: 2    INKIISFSIKNKFIVGLLTLALIGVGIYSMATVNLGSVPDITNNQVQVMTVSPNLATEDI 61

Query: 65   EKFITIPIEIAMNPVQKKTDIRSTTLFGLSVINVMFEDRVDDFTARQQVYNLLNDAD--L 122
            E+F+T P+E+AM  +    +IRS + FGLSV+ ++FED +  +  RQ V   LN+    +
Sbjct: 62   EQFVTYPVELAMGNLPGVDEIRSISRFGLSVVTIVFEDEMGIYKPRQLVQEKLNELKETI 121

Query: 123  PEGV-TPEVQPLYGPTGEIYRYTLR-----SDRRSVRDLKTIQDWVIERNLRSVSGVADI 176
            PE   +P + P+    G+IY YT++      D+ S  +L+TIQDW+++R L  + GV ++
Sbjct: 122  PEKFGSPTMGPISTGLGQIYEYTIQPKEGYEDQYSPMELRTIQDWIVKRQLTLLDGVVEV 181

Query: 177  VSFGGEVKTFEVSVNPHQLINYGITSLELYDAIAKSNINVGGDVITKSSQAYVVRGIGLI 236
             SFGG +K +EV++NP +L    ++  ++Y+A+A++N+N GG  I K+  +  +RG GL+
Sbjct: 182  NSFGGYIKQYEVAINPEKLNAQNVSISQVYEALARNNVNTGGAYIEKNRMSNFIRGEGLV 241

Query: 237  NDLDELRNIVVKNINGTPILVKNLAD-VHESCLPRLGQVGRMDENDVVQGIVVMRKGENP 295
              LD++R IV+K  NG P+ + ++A+ VH     R G   + D  + V GI++M KG NP
Sbjct: 242  RSLDDIRKIVIKTENGIPVTIGDVAEKVHFGNQVRYGAFTQ-DGKEAVGGIIMMMKGSNP 300

Query: 296  GEVIANLKDKIEELNQNVLPEDVRIIPFYDREDLVNLAVKTVTHNLIEGILLVTFIVLIF 355
              VI ++K ++EE+ ++ LPE + I    DR DL++    TV  NL EG L+V F ++I 
Sbjct: 301  NAVIQDVKARMEEVEKS-LPEGLTINTIIDRSDLISRTTDTVKTNLFEGALIVIFALVIL 359

Query: 356  MADWRTTVIVAVIIPLALLFAFICLRVMGMSANLLSMGAIDFGIIIDGAVVMVEGVFVAL 415
            +   R  +I A  IPL+LLFAFI ++   + ANL+S+GAIDFGIIIDGAV+++EG    +
Sbjct: 360  LGSLRGGIITATTIPLSLLFAFIMMKQFNVWANLMSLGAIDFGIIIDGAVIIIEGTVYEI 419

Query: 416  DKKAKEVGMPAFNVMSKMGLIRHTAKDKAKAVFFSKLIIITALIPIFSFQKVEGKMFSPL 475
             K+ +  G   FN +    +          + FF ++II+    PI     VEGKMF P+
Sbjct: 420  QKRIRS-GKIKFNQVLMDEVAYDAGSTMMGSAFFGQIIILIVFAPILFLTGVEGKMFQPM 478

Query: 476  AYTLGFALLGALIFTLTLVPVMSSMLLKKNVREKN-----NRFVHFINQKCTALFDTFYA 530
            AYT GFA++GA+I  LT VP+MS++ +K    +KN      R++  ++ K        Y 
Sbjct: 479  AYTFGFAMIGAIILCLTYVPMMSALFMKPIQNKKNWFGRFERWLERVSDKIIGSIQKVYL 538

Query: 531  --------HRKLTIGLATVVAGVGLWLFSFLGTEFLPQLNEGSIYIRATLPQSISLDESV 582
                     + + I +A V+ G   ++FS +G EF+PQL+EG I ++A +    SL ES 
Sbjct: 539  PLLKGALRFKAIVIIVAIVLLGAAGFVFSRMGGEFVPQLDEGDIAMQALIRPGSSLSESK 598

Query: 583  TLANKMRKKLL-TFPEVRQVLSQTGRPNDGTDATGFYNIEFHVDIYPEKD-WESKLTKLQ 640
             ++ K+   LL +FPE++ V ++ G  +  TD       + ++ +  +KD W S  TK +
Sbjct: 599  EVSIKIENLLLESFPEIKTVTARIGVADIPTDPMPMDIADMYLILEKDKDQWVSAETKDE 658

Query: 641  LIDKMQEDLSIY-PGIDFNFSQPITDNVEEAASGVKGSIAVKVFGKDLYESEKLAVQIDK 699
            LI+++++ L  +  G++  F+QP+     E   GV+  IAVK++G+DL    +   ++  
Sbjct: 659  LIEQIKDKLETHLTGVNLVFTQPVELRFNELLEGVREDIAVKLYGEDLEVLSEKVQEMAN 718

Query: 700  ILNTVQGIEDLGVIRNIGQPELRIELNERQLARYGVAKEDVQSIIEMAIGGKSASLLYED 759
            I++TV G  D+   R  G P++ +  N  ++A+YG+  + +   +  A  G  A +++E 
Sbjct: 719  IISTVSGAGDVNPERTSGLPQMTVRYNRDKVAQYGLVIQKLNEYVSSAFAGGVAGVIFEG 778

Query: 760  ERKFNIMVRYSEEFRQNEEEIGKILVPAMDGTMVPIKELADITTITGPLLIFRDNHARFC 819
            E++F++++R+ E  R++ +++  + +   DGT VPIKE+ADI+ + GP+ I RDN  R  
Sbjct: 779  EKRFDLVIRFDEAHRKSIDDLRTLYIDLPDGTQVPIKEVADISYMPGPMQISRDNTYRRT 838

Query: 820  AVKFSVRGRDMGTAVAEAQKKVNASVHLPAGYSLKWTGDFENQQRASKRLAQVVPISIAI 879
             V  + RGRD+ + V + Q+K++A + LP GY + + G+FEN QRA  RL  VVPI++ +
Sbjct: 839  YVGVNTRGRDVESVVNDIQEKLDAELDLPPGYYITYGGEFENLQRAKSRLQIVVPIALFL 898

Query: 880  IFIILFILFSNARDAGLVLLNVPFAAVGGIAALLITGFNFSISAGIGFIALFGICIQNGV 939
            IF++L+    +   + ++ + +P AA+GG+  L I G  FSISAG+GFI LFG+ + NG+
Sbjct: 899  IFVLLYFALKSFSQSIMIYMAIPLAAIGGVFGLWIRGMPFSISAGVGFIVLFGVAVLNGL 958

Query: 940  IMISDIKANLKLG-SPLQEATKEGVRSRIRPVIMTAAMAAIGLLPAAMSHGIGSESQRPL 998
            ++I+   +  + G + ++E    G + RIRP+++TA     G LP A S   G+E QRPL
Sbjct: 959  VLINRFNSLKEEGVTSIRERILTGTKERIRPIMLTATTDIFGFLPMAFSASAGAEVQRPL 1018

Query: 999  AIVIIGGLIGATFFALFIFPLIVEVVYER 1027
            A V+IGG++ AT   L + P++   V  R
Sbjct: 1019 ATVVIGGMLTATLLTLVVLPVLYTFVEGR 1047



 Score = 52.0 bits (123), Expect = 3e-10
 Identities = 72/369 (19%), Positives = 158/369 (42%), Gaps = 43/369 (11%)

Query: 162  VIERNLRSVSGVADIVSFGGEVKTFEVSVNPHQLINYGITSLELYDAIAK------SNIN 215
            V+   ++ ++ +   VS  G+V     S  P   + Y    +  Y  + +      S+  
Sbjct: 708  VLSEKVQEMANIISTVSGAGDVNPERTSGLPQMTVRYNRDKVAQYGLVIQKLNEYVSSAF 767

Query: 216  VGG------------DVITKSSQAYVVRGIGLINDLDELRNIVVKNINGTPILVKNLADV 263
             GG            D++ +  +A+          +D+LR + +   +GT + +K +AD+
Sbjct: 768  AGGVAGVIFEGEKRFDLVIRFDEAHR-------KSIDDLRTLYIDLPDGTQVPIKEVADI 820

Query: 264  HESCLPRLGQVGRMDENDVVQGIVVMRKGENPGEVIANLKDKIE-ELNQNVLPEDVRIIP 322
              S +P   Q+ R D       + V  +G +   V+ ++++K++ EL+   LP    I  
Sbjct: 821  --SYMPGPMQISR-DNTYRRTYVGVNTRGRDVESVVNDIQEKLDAELD---LPPGYYITY 874

Query: 323  FYDREDLVNLAVKTVTHNLIEGILLVTFIVLIF-MADWRTTVIVAVIIPLALLFAFICLR 381
              + E+L     K+    ++   L + F++L F +  +  ++++ + IPLA +     L 
Sbjct: 875  GGEFENLQR--AKSRLQIVVPIALFLIFVLLYFALKSFSQSIMIYMAIPLAAIGGVFGLW 932

Query: 382  VMGMSANLLSMGAIDFGIIIDGAVVMVEGVFVALDKKAKEVGMPAFNVMSKMGLIRHTAK 441
            + GM  ++ +   + F I++ G  V+   V +      KE G+ +       G      K
Sbjct: 933  IRGMPFSISA--GVGF-IVLFGVAVLNGLVLINRFNSLKEEGVTSIRERILTG-----TK 984

Query: 442  DKAKAVFFSKLIIITALIPIFSFQKVEGKMFSPLAYTLGFALLGALIFTLTLVPVMSSML 501
            ++ + +  +    I   +P+        ++  PLA  +   +L A + TL ++PV+ + +
Sbjct: 985  ERIRPIMLTATTDIFGFLPMAFSASAGAEVQRPLATVVIGGMLTATLLTLVVLPVLYTFV 1044

Query: 502  LKKNVREKN 510
              +  + K+
Sbjct: 1045 EGRREKGKS 1053