Pairwise Alignments

Query, 1041 a.a., cation efflux system protein czcA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1443 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  665 bits (1715), Expect = 0.0
 Identities = 371/1044 (35%), Positives = 596/1044 (57%), Gaps = 19/1044 (1%)

Query: 5    IDNIVAFSLKNKFFIFFCTVIAVIAGAVSFKHTPIDAFPDVTNTKVTIITQWAGRSAEEV 64
            +  ++ +SL++K  I   T+  +  G  +  H P+ A PD+TN +V +IT     + E+V
Sbjct: 2    LQKLIQYSLQHKLVILLFTLGILGFGLYALTHIPLGAVPDITNNQVQVITTSKNLATEDV 61

Query: 65   EKFITIPIEIAMNPVQKKTDIRSTTLFGLSVINVMFEDRVDDFTARQQVYNLLNDAD--L 122
            EKF+T P+E+ M  +    +IRS + FGLS++ V+F+D+   +  RQ +   L  A+  +
Sbjct: 62   EKFLTYPVELEMANLPNVKEIRSVSKFGLSIVTVVFDDKAGTYLPRQLIAEKLKLAEERI 121

Query: 123  PEGV-TPEVQPLYGPTGEIYRYTLR-----SDRRSVRDLKTIQDWVIERNLRSVSGVADI 176
            PEG  +P + P+    GEIY+Y +          S  DL+TIQDW+I R L  + GV +I
Sbjct: 122  PEGFGSPFMGPISTGLGEIYQYIIDVAPEYKGEYSTADLRTIQDWIIRRQLSGIPGVVEI 181

Query: 177  VSFGGEVKTFEVSVNPHQLINYGITSLELYDAIAKSNINVGGDVITKSSQAYVVRGIGLI 236
             ++GG +K +EV+V+P +L    I   +LY  +  +N   GG  I K+ + Y VRG GL+
Sbjct: 182  NTWGGYLKQYEVAVDPEKLRAMNIPLRKLYTVLRDNNSIAGGGYIEKTEETYFVRGEGLV 241

Query: 237  NDLDELRNIVVKNINGTPILVKNLADVHESCLPRLGQVGRMDENDVVQGIVVMRKGENPG 296
              L+++ NIVV+N NG P+ V ++A+V      R G +    E + V G V+M KG +  
Sbjct: 242  ESLEDIGNIVVENRNGVPVYVSDVAEVRFGHATRFGAITGNGEGEKVLGQVMMLKGADSQ 301

Query: 297  EVIANLKDKIEELNQNVLPEDVRIIPFYDREDLVNLAVKTVTHNLIEGILLVTFIVLIFM 356
             VI  + +++E +  + LP  + I PF +R +L+     T+  NLI G L+V F+V++ +
Sbjct: 302  AVINAVAERVEAIKPS-LPPGIIINPFLERSELIGKTTFTIAENLILGCLIVIFVVVLLL 360

Query: 357  ADWRTTVIVAVIIPLALLFAFICLRVMGMSANLLSMGAIDFGIIIDGAVVMVEGVFVALD 416
             + R+ ++VA +IPL LLFA   + + G+ ANL+S+GAIDFGIIIDGAV++VE  F+A  
Sbjct: 361  GNLRSALVVASVIPLCLLFALSLMYLTGVDANLMSLGAIDFGIIIDGAVIIVE--FIAYQ 418

Query: 417  KKAKEVGMPAFNVMSKMGLIRHT----AKDKAKAVFFSKLIIITALIPIFSFQKVEGKMF 472
              A+   +       +   I       A     +  F +LIII   IPI S   VEGKMF
Sbjct: 419  ITAQNASLIGLKGKERQVAIDRITFLGASKMMHSAVFGQLIIIIVFIPILSLVNVEGKMF 478

Query: 473  SPLAYTLGFALLGALIFTLTLVPVMSSMLLKKNVREKNNRFVHFINQKCTALFDTFY--- 529
             P+A    +AL+GA++   T VPVMS++ +K + +   N  V  I           Y   
Sbjct: 479  RPMAMVFCYALVGAMVLCFTYVPVMSALFIKPSKKSGANISVKLIAAVYRIYQPAIYWSL 538

Query: 530  AHRKLTIGLATVVAGVGLWLFSFLGTEFLPQLNEGSIYIRATLPQSISLDESVTLANKMR 589
             H+K+ + +A  +  +   LF  +G EF+P L+EG   I+  L    SL +++    KM 
Sbjct: 539  RHKKMVLSMAGGLLLLAGLLFFRMGGEFVPTLDEGDFVIQPVLKTGTSLQKTIETTTKME 598

Query: 590  KKLLTFPEVRQVLSQTGRPNDGTDATGFYNIEFHVDIYPEKDWESKLTKLQLIDKMQEDL 649
            K LL FPEV QV+++ G     TD       +  + ++P+++W +  TK  L D  +  L
Sbjct: 599  KILLGFPEVDQVVTRIGAAEVPTDPMSMEESDVIIKLHPKEEWVTAETKDGLADAFKTAL 658

Query: 650  SIYPGIDFNFSQPITDNVEEAASGVKGSIAVKVFGKDLYESEKLAVQIDKILNTVQGIED 709
            SI PGIDF F+QPI     E  +GV+  +A+K+FG+DL    + A++++  +  V+G  D
Sbjct: 659  SILPGIDFEFTQPIEMRFNELITGVRADLAIKIFGEDLDLLYQKALEVETAIQQVEGASD 718

Query: 710  LGVIRNIGQPELRIELNERQLARYGVAKEDVQSIIEMAIGGKSASLLYEDERKFNIMVRY 769
            + V +  G P++ +  + R++A+YG+    +  +I M   G  A  ++E E++F++++R+
Sbjct: 719  IIVEKTAGLPQMSVNYDRRKIAKYGLNVSALNELISMGFAGLPAGTVFEGEKQFDLVLRF 778

Query: 770  SEEFRQNEEEIGKILVPAMDGTMVPIKELADITTITGPLLIFRDNHARFCAVKFSVRGRD 829
              E R++ E+I    V   +G  +P+ E A I   TGP  I RD+  R   V  +VR RD
Sbjct: 779  DPEHRKSLEDIQSASVQLPNGHSLPLSEFASIGFTTGPAKISRDDTKRRIVVGVNVRNRD 838

Query: 830  MGTAVAEAQKKVNASVHLPAGYSLKWTGDFENQQRASKRLAQVVPISIAIIFIILFILFS 889
            + + V + +K +   + LP GYS+ + G FEN + A +RL   VPI++ +IF++L+  F 
Sbjct: 839  LESVVEDVRKIIEEKIELPTGYSVTYGGQFENLRTARERLMVAVPIALLLIFVMLYFAFG 898

Query: 890  NARDAGLVLLNVPFAAVGGIAALLITGFNFSISAGIGFIALFGICIQNGVIMISDIKANL 949
            + ++A ++   +P AAVGG+  L   G  FSISAG+GFIALFGI + NG+++I + K   
Sbjct: 899  SIKEAFIIYSAIPLAAVGGVFLLYFRGLPFSISAGVGFIALFGIAVLNGIVLIEEFKELR 958

Query: 950  KLG-SPLQEATKEGVRSRIRPVIMTAAMAAIGLLPAAMSHGIGSESQRPLAIVIIGGLIG 1008
              G   + +A   G + R+RPV++TA+ AA+G LP A+SH  G+E QRPLA V++GGL+ 
Sbjct: 959  DQGIKNVHKAVLIGTKKRLRPVLLTASAAALGFLPMAVSHSAGAEVQRPLATVVVGGLVT 1018

Query: 1009 ATFFALFIFPLIVEVVYERMLYDK 1032
            AT   L + P++  ++  + +  K
Sbjct: 1019 ATLLTLLVVPVLYTIMSAQKIIPK 1042