Pairwise Alignments

Query, 1041 a.a., cation efflux system protein czcA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1481 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  675 bits (1741), Expect = 0.0
 Identities = 375/1049 (35%), Positives = 626/1049 (59%), Gaps = 29/1049 (2%)

Query: 5    IDNIVAFSLKNKFFIFFCTVIAVIAGAVSFKHTPIDAFPDVTNTKVTIITQWAGRSAEEV 64
            I+ I++FS+KNKF +   T+  +  G  S     + + PD+TN +V +IT     + E++
Sbjct: 2    INKIISFSIKNKFIVGLLTLALIGVGIYSMSTVNLGSVPDITNNQVQVITVSPNLATEDI 61

Query: 65   EKFITIPIEIAMNPVQKKTDIRSTTLFGLSVINVMFEDRVDDFTARQQVYNLLNDAD--L 122
            E+F+T P+E+AM  +    +IRS + FGLSV+ ++FED +  +  RQ V   LN+    +
Sbjct: 62   EQFVTYPVELAMGNLPGVDEIRSISRFGLSVVTIVFEDDMGTYLPRQLVQEKLNELQETI 121

Query: 123  PEGV-TPEVQPLYGPTGEIYRYTLR-----SDRRSVRDLKTIQDWVIERNLRSVSGVADI 176
            P+   +P + P+    G+IY YT++       + S  +L+TIQ+W+++R L  + GV ++
Sbjct: 122  PQKFGSPTMGPISTGLGQIYEYTIQPQEGYESQYSPMELRTIQEWIVKRQLTLLDGVVEV 181

Query: 177  VSFGGEVKTFEVSVNPHQLINYGITSLELYDAIAKSNINVGGDVITKSSQAYVVRGIGLI 236
             SFGG +K +EV++NP +L    ++  E+Y+A+A++N+N GG  I K+  +  +RG GL+
Sbjct: 182  NSFGGYIKQYEVAINPEKLNAMNVSISEVYEALARNNVNTGGAYIEKNRMSNFIRGEGLV 241

Query: 237  NDLDELRNIVVKNINGTPILVKNLAD-VHESCLPRLGQVGRMDENDVVQGIVVMRKGENP 295
              LD++R IV+   NG PI + ++A+ VH     R G   + D  + V GI++M KG NP
Sbjct: 242  RSLDDIRKIVITTENGLPITIGDVAEKVHFGNQVRYGAFTQ-DGKEAVGGIIMMLKGSNP 300

Query: 296  GEVIANLKDKIEELNQNVLPEDVRIIPFYDREDLVNLAVKTVTHNLIEGILLVTFIVLIF 355
              VI N+K+++EE+ ++ LPE + I    DR DL++    TV  NLIEG L+V F ++I 
Sbjct: 301  NAVIQNVKERMEEVEKS-LPEGLAINSIIDRSDLISRTTDTVKQNLIEGALIVIFALVIL 359

Query: 356  MADWRTTVIVAVIIPLALLFAFICLRVMGMSANLLSMGAIDFGIIIDGAVVMVEGVFVAL 415
            +   R  +I A  IPL+LLFAFI ++   + ANL+S+GAIDFGIIIDGAV+++EG    +
Sbjct: 360  LGSLRGGIITATTIPLSLLFAFILMKQFNVWANLMSLGAIDFGIIIDGAVIIIEGTVYEI 419

Query: 416  DKKAKEVGMPAFNVMSKMGLIRHTAKDKAKAVFFSKLIIITALIPIFSFQKVEGKMFSPL 475
             K+ +  G   FN +    +          + FF ++II+    PI     VEGKMF P+
Sbjct: 420  QKRIRS-GKIKFNQVVMDEVAYDAGSTMMSSAFFGQIIILIVFAPILFLTGVEGKMFQPM 478

Query: 476  AYTLGFALLGALIFTLTLVPVMSSMLLKKNVREKN-----NRFVHFINQKCTA------- 523
            AYT GFA++GA+I  LT VP+MS++ +K    +KN      R++  ++ K          
Sbjct: 479  AYTFGFAMIGAIILCLTYVPMMSALFMKPIQNKKNWFGRFERWLEKVSDKIIGGIQYAYL 538

Query: 524  -LFDTFYAHRKLTIGLATVVAGVGLWLFSFLGTEFLPQLNEGSIYIRATLPQSISLDESV 582
             L  +    + + I +A V+ G+  ++FS +G EF+PQL+EG I ++A +    SL ES 
Sbjct: 539  PLLKSALRFKAVVIIVAIVLLGLAGFIFSRMGGEFVPQLDEGDIAMQALIRPGSSLSESK 598

Query: 583  TLANKMRKKLL-TFPEVRQVLSQTGRPNDGTDATGFYNIEFHVDIYPEKD-WESKLTKLQ 640
             ++ K+ + LL +FPE++ V ++ G  +  TD       + ++ +  +KD W S  TK +
Sbjct: 599  DVSIKIEELLLKSFPEIKTVTARIGVADIPTDPMPMDIADMYLILEKDKDQWVSAETKDE 658

Query: 641  LIDKMQEDLSI-YPGIDFNFSQPITDNVEEAASGVKGSIAVKVFGKDLYESEKLAVQIDK 699
            LI+++++ L     G++  F+QP+     E   GV+  IAVK++G+DL        ++  
Sbjct: 659  LIEQIKDKLETNMTGVNLVFTQPVELRFNELLEGVREDIAVKLYGEDLEMLSAKVQEMAD 718

Query: 700  ILNTVQGIEDLGVIRNIGQPELRIELNERQLARYGVAKEDVQSIIEMAIGGKSASLLYED 759
            I++TV G  D+   R  G P++ +  N  ++A+YG+  + +   +  A  G  A +++E 
Sbjct: 719  IISTVPGAGDVNPERTSGLPQMTVRYNRDKVAQYGLDIQKLNEYVSTAFAGGVAGVIFEG 778

Query: 760  ERKFNIMVRYSEEFRQNEEEIGKILVPAMDGTMVPIKELADITTITGPLLIFRDNHARFC 819
            E++F++++R+ E  R++ +++  + +   DGT VPIKE+ADI+ + GP+ I RDN  R  
Sbjct: 779  EKRFDLVIRFDEAHRKSIDDLRTLYIDLPDGTQVPIKEVADISYVPGPMQISRDNTYRRT 838

Query: 820  AVKFSVRGRDMGTAVAEAQKKVNASVHLPAGYSLKWTGDFENQQRASKRLAQVVPISIAI 879
             V  +VRGRD+ + V + Q+K+++ + LPAGY + + G+FEN QRA +RL  VVPI++ +
Sbjct: 839  YVGVNVRGRDVESVVNDIQEKLDSELDLPAGYYISYGGEFENLQRAKQRLQIVVPIALFL 898

Query: 880  IFIILFILFSNARDAGLVLLNVPFAAVGGIAALLITGFNFSISAGIGFIALFGICIQNGV 939
            IF++L+    +   + ++ + +P AA+GG+ AL +    FSISAG+GFI LFG+ + NG+
Sbjct: 899  IFVLLYFALKSFSQSIMIYIAIPLAAIGGVFALWLRDMPFSISAGVGFIVLFGVAVLNGL 958

Query: 940  IMISDIKANLKLG-SPLQEATKEGVRSRIRPVIMTAAMAAIGLLPAAMSHGIGSESQRPL 998
            ++I+   +  + G + +++    G + RIRP+++TA     G LP A S   G+E QRPL
Sbjct: 959  VLINRFNSLKEEGVTSIRDRILTGTKERIRPIMLTATTDIFGFLPMAFSASAGAEVQRPL 1018

Query: 999  AIVIIGGLIGATFFALFIFPLIVEVVYER 1027
            A V+IGG++ AT   L + P++   V  R
Sbjct: 1019 ATVVIGGMLTATLLTLVVLPVLYTFVEGR 1047



 Score = 44.7 bits (104), Expect = 5e-08
 Identities = 55/272 (20%), Positives = 124/272 (45%), Gaps = 16/272 (5%)

Query: 239  LDELRNIVVKNINGTPILVKNLADVHESCLPRLGQVGRMDENDVVQGIVVMRKGENPGEV 298
            +D+LR + +   +GT + +K +AD+  S +P   Q+ R D       + V  +G +   V
Sbjct: 796  IDDLRTLYIDLPDGTQVPIKEVADI--SYVPGPMQISR-DNTYRRTYVGVNVRGRDVESV 852

Query: 299  IANLKDKIEELNQNVLPEDVRIIPFYDREDLVNLAVKTVTHNLIEGILLVTFIVLIF-MA 357
            + ++++K++  ++  LP    I    + E+L     K     ++   L + F++L F + 
Sbjct: 853  VNDIQEKLD--SELDLPAGYYISYGGEFENLQR--AKQRLQIVVPIALFLIFVLLYFALK 908

Query: 358  DWRTTVIVAVIIPLALLFAFICLRVMGMSANLLSMGAIDFGIIIDGAVVMVEGVFVALDK 417
             +  ++++ + IPLA +     L +  M  ++ +   + F I++ G  V+   V +    
Sbjct: 909  SFSQSIMIYIAIPLAAIGGVFALWLRDMPFSISA--GVGF-IVLFGVAVLNGLVLINRFN 965

Query: 418  KAKEVGMPAFNVMSKMGLIRHTAKDKAKAVFFSKLIIITALIPIFSFQKVEGKMFSPLAY 477
              KE G+ +       G      K++ + +  +    I   +P+        ++  PLA 
Sbjct: 966  SLKEEGVTSIRDRILTG-----TKERIRPIMLTATTDIFGFLPMAFSASAGAEVQRPLAT 1020

Query: 478  TLGFALLGALIFTLTLVPVMSSMLLKKNVREK 509
             +   +L A + TL ++PV+ + +  ++ + K
Sbjct: 1021 VVIGGMLTATLLTLVVLPVLYTFVEGRSDKRK 1052