Pairwise Alignments

Query, 1041 a.a., cation efflux system protein czcA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1451 a.a., heavy metal efflux pump (cobalt-zinc-cadmium) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  724 bits (1869), Expect = 0.0
 Identities = 396/1031 (38%), Positives = 623/1031 (60%), Gaps = 16/1031 (1%)

Query: 5    IDNIVAFSLKNKFFIFFCTVIAVIAGAVSFKHTPIDAFPDVTNTKVTIITQWAGRSAEEV 64
            I+ ++ FS+KNK  I   T+  +  G  S    PIDA PD+TN +V +ITQ      E++
Sbjct: 2    INRLITFSIKNKLIIGLFTLALIGLGVWSMLQVPIDAVPDITNNQVQVITQAPNLGTEDI 61

Query: 65   EKFITIPIEIAMNPVQKKTDIRSTTLFGLSVINVMFEDRVDDFTARQQVYNLLNDA--DL 122
            E+F+T P+E+AM  +    ++RS + FGLSV+ ++FED    +  RQ V   LN    ++
Sbjct: 62   EQFVTYPVELAMANLPGVKEVRSVSRFGLSVVTIVFEDDQGTYLPRQLVAEKLNQVRDEI 121

Query: 123  PEGV-TPEVQPLYGPTGEIYRYTLR-----SDRRSVRDLKTIQDWVIERNLRSVSGVADI 176
            P+G   P + P+    GEIY+YTL       D  ++  L+TIQDW+++R +  V GV ++
Sbjct: 122  PDGFGKPSMGPISTGLGEIYQYTLEVDSAFRDHYTLTQLRTIQDWIVKRQMAMVPGVVEV 181

Query: 177  VSFGGEVKTFEVSVNPHQLINYGITSLELYDAIAKSNINVGGDVITKSSQAYVVRGIGLI 236
             +FGG++K +EV+V+P +L   GI+  ++Y A+AK+N N GG  I ++  A  +RG GL+
Sbjct: 182  NAFGGKIKQYEVAVDPDELSAIGISISDIYAALAKNNQNTGGAYIERNHHANFIRGEGLV 241

Query: 237  NDLDELRNIVVKNINGTPILVKNLADVHESCLPRLGQVGRMDENDVVQGIVVMRKGENPG 296
              LD++RNI V N NG P+ +K++A+V      R G   +  + + V G+++M KG N  
Sbjct: 242  RSLDDIRNITVANQNGIPLKIKDVAEVRFGHAVRYGAFTKNGKGEAVGGMILMLKGANSE 301

Query: 297  EVIANLKDKIEELNQNVLPEDVRIIPFYDREDLVNLAVKTVTHNLIEGILLVTFIVLIFM 356
            +VI  +K++I ++ Q+ LPE VRI PF DR DLV     TV+ NL+EG L+V F++++ +
Sbjct: 302  KVITAVKERINQIQQS-LPEGVRIKPFLDRSDLVKETTATVSTNLLEGGLIVVFVLVLLL 360

Query: 357  ADWRTTVIVAVIIPLALLFAFICLRVMGMSANLLSMGAIDFGIIIDGAVVMVEGVFVALD 416
             +WR  +IVA  IPL+LLFAFI +   G+ ANL+S+GAIDFGII+DGAV++VE     L 
Sbjct: 361  GNWRGGLIVASTIPLSLLFAFIMMNAFGVWANLMSLGAIDFGIIVDGAVIIVESSVYYLH 420

Query: 417  KKAKEVGMPAFNVMSKMGLIRHTAKDKAKAVFFSKLIIITALIPIFSFQKVEGKMFSPLA 476
            +K     +       K   +   +K    A FF +LII+   +PI + + VEGKMF P+A
Sbjct: 421  QKIPTTKLMTAKDRDKQAAL--ASKKMMNAAFFGQLIILIVFLPILALEGVEGKMFRPMA 478

Query: 477  YTLGFALLGALIFTLTLVPVMSSMLLK--KNVREK-NNRFVHFINQKCTALFDTFYAHRK 533
             T  FA+LGA+I  LT VP+MS+  ++  K  R+   ++ + ++  K   L +      K
Sbjct: 479  LTFIFAMLGAMILCLTYVPMMSAAFIRVAKPTRKSWGDKVIMWLESKYVPLLEQALKKGK 538

Query: 534  LTIGLATVVAGVGLWLFSFLGTEFLPQLNEGSIYIRATLPQSISLDESVTLANKMRKKLL 593
              +G+A V+ G   +LF  +G EF+PQL+EG I     L    SL ESV  + ++ K +L
Sbjct: 539  WIVGMAIVLFGTTCFLFKNMGGEFIPQLDEGDIAFHIMLAPGSSLSESVATSTRVEKIIL 598

Query: 594  -TFPEVRQVLSQTGRPNDGTDATGFYNIEFHVDIYPEKDWESKLTKLQLIDKMQEDLSIY 652
              FPEV QV+S+ G  +  TD       +  V + P+ +W S  +K +LI+K++  +S+ 
Sbjct: 599  ENFPEVEQVMSRFGVADVPTDPMPMDIGDCFVILKPQDEWVSASSKEELIEKIKAKISVI 658

Query: 653  PGIDFNFSQPITDNVEEAASGVKGSIAVKVFGKDLYESEKLAVQIDKILNTVQGIEDLGV 712
            PG+++ F+QPI     E  +GV+  IA+K+FG+DL      A  I +++  + G+ DL V
Sbjct: 659  PGVNYEFTQPIEMRFNELLTGVREDIAIKLFGEDLDILAAKANSIGQLIQGIDGVADLRV 718

Query: 713  IRNIGQPELRIELNERQLARYGVAKEDVQSIIEMAIGGKSASLLYEDERKFNIMVRYSEE 772
                G P++ I  +  +LA+Y +    + +I++ A  GKSA  ++E E++F++++R    
Sbjct: 719  EATTGLPQMTIRYDREKLAQYDLDVSALNTIVQTAFAGKSAGAVFEGEKRFDLVIRQDAS 778

Query: 773  FRQNEEEIGKILVPAMDGTMVPIKELADITTITGPLLIFRDNHARFCAVKFSVRGRDMGT 832
             R++ E+I  + V   +   +P+KE+A+I+   GP+ I RDN  R   V  +VRGRD+ +
Sbjct: 779  SRKSIEDIKNLYVNISEDYQIPLKEVAEISYKPGPMQISRDNTNRRTYVGINVRGRDVAS 838

Query: 833  AVAEAQKKVNASVHLPAGYSLKWTGDFENQQRASKRLAQVVPISIAIIFIILFILFSNAR 892
             V E Q  +  S+ LP GY +++ G FEN +RASKRL  VVP+++A IFI++F   ++ +
Sbjct: 839  LVKEIQDTLEDSLELPPGYYIRYGGAFENFERASKRLQLVVPVALASIFILIFFALNSLK 898

Query: 893  DAGLVLLNVPFAAVGGIAALLITGFNFSISAGIGFIALFGICIQNGVIMISDIKANLKLG 952
               ++ + +P AAVGGI AL +    FSISAG+GFI LFG+ + NG+++I+ +    + G
Sbjct: 899  QTLMIYMAIPLAAVGGIGALWLRDMPFSISAGVGFIVLFGVAVLNGLVLINGLNELKEAG 958

Query: 953  S-PLQEATKEGVRSRIRPVIMTAAMAAIGLLPAAMSHGIGSESQRPLAIVIIGGLIGATF 1011
               L E  K G + RIRP+++TA    +G LP A+S   G+E QRPLA V+IGGL+ AT 
Sbjct: 959  HLSLLERIKTGTKRRIRPILLTAVTDILGFLPMAISQSAGAEVQRPLATVVIGGLLTATL 1018

Query: 1012 FALFIFPLIVE 1022
              LF+ P++ +
Sbjct: 1019 LTLFLIPILYQ 1029



 Score = 45.8 bits (107), Expect = 2e-08
 Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 28/270 (10%)

Query: 239  LDELRNIVVKNINGTPILVKNLADVHESCLPRLGQVGRMDENDVVQGIVVMRKGENPGEV 298
            +++++N+ V       I +K +A++  S  P   Q+ R + N      + +R     G  
Sbjct: 783  IEDIKNLYVNISEDYQIPLKEVAEI--SYKPGPMQISRDNTNRRTYVGINVR-----GRD 835

Query: 299  IANLKDKIEELNQNVLPEDVRIIP-FYDRED--LVNLAVKTVTHNLIEGILLVTFIVLIF 355
            +A+L  +I    Q+ L + + + P +Y R      N    +    L+  + L +  +LIF
Sbjct: 836  VASLVKEI----QDTLEDSLELPPGYYIRYGGAFENFERASKRLQLVVPVALASIFILIF 891

Query: 356  MA--DWRTTVIVAVIIPLALL--FAFICLRVMGMSANLLSMGAIDFGIIIDGAVVMVEGV 411
             A    + T+++ + IPLA +     + LR M  S +      + FG+ +   +V++ G+
Sbjct: 892  FALNSLKQTLMIYMAIPLAAVGGIGALWLRDMPFSISAGVGFIVLFGVAVLNGLVLINGL 951

Query: 412  FVALDKKAKEVGMPAFNVMSKMGLIRHTAKDKAKAVFFSKLIIITALIPIFSFQKVEGKM 471
                  + KE G      +S +  I+   K + + +  + +  I   +P+   Q    ++
Sbjct: 952  -----NELKEAGH-----LSLLERIKTGTKRRIRPILLTAVTDILGFLPMAISQSAGAEV 1001

Query: 472  FSPLAYTLGFALLGALIFTLTLVPVMSSML 501
              PLA  +   LL A + TL L+P++   L
Sbjct: 1002 QRPLATVVIGGLLTATLLTLFLIPILYQWL 1031