Pairwise Alignments

Query, 420 a.a., cation efflux system protein czcC (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 416 a.a., outer membrane efflux protein precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 78/394 (19%), Positives = 169/394 (42%), Gaps = 22/394 (5%)

Query: 25  TLTLKEAEQRFLERNLSLIAERYNIDMAQAQVLQAKLFENPVISLEQNVYNRLNGKYFDF 84
           +++ +E   R  ++NLS +AE+ N+ +A A+V+  K+F +P +  E         + F  
Sbjct: 35  SISFEEYLNRVAKKNLSYLAEKLNVSIADAEVIARKIFPDPELEFEAG------NETFSL 88

Query: 85  GKEGEAVVEIEQVIHLAGQRNKQVRLEKINKEIAEYQFEEVMRTLRQELNEKFVEVYFLS 144
           G        +   + +  +R  +++L +   E+ +   ++  + LR E  + F+E     
Sbjct: 89  G--------VSYSLEMGNKRGARIKLARTQAELEKLVLQQGFQDLRAEAADLFLEAILQR 140

Query: 145 KSIAIYEKEVNSLQVLLGGMKIQQEKGNISLMEISRLESMLFSLRKEKNERENDLLTTRG 204
           + + + +     +  L     ++   G I+  ++ + +    +L      +E    +   
Sbjct: 141 ELLEVQKSSYEYMYQLSQSDSLRYVSGEITENDVRQSKLETVTLLNTVYSQEAAYHSALV 200

Query: 205 ELNLLLNLPEDT-QVQLSLDEEVLQQLDLSQLSFADLKAIINERPDQKIARSTVNASRAN 263
            LN  + +  DT  + L   EE+ +   LS L    +KA ++ R D  +A+ +   +   
Sbjct: 201 LLNKHMGMSADTLHIPLGNWEELSRDFALSDL----VKAGLDNRIDLLVAQKSTEVTTRE 256

Query: 264 LKLQKSMAFPEFSVKGNYDRVGNFI---NDYFAIGVSLSVPIFNRNQGNIKAARFSIQQA 320
            KL ++   P+  V  +Y+R  N     +     GVS+ +   N N+G +KAA+F I Q+
Sbjct: 257 YKLTRAERRPDIGVSVSYERNWNGFLPPSRSATAGVSVPLTFSNINKGAVKAAKFRIAQS 316

Query: 321 GVQQEYAANRADMELFTAYTSLEKATQLYQSTNMDLERNFEKLITGVNENFTRKNISLLE 380
            + +     +   E+  A+ + E   +        +  + +K++ G+   + R   S+L+
Sbjct: 317 EIMERDMELQIQTEITQAWFNYEAEKKKIAQYKAGVLEDSQKVLDGMVYKYKRGETSILD 376

Query: 381 FIDYYDSYKETCIQLYEIKKNVFLAMENLNTVVG 414
            +    +Y E   +  E  K    ++  L    G
Sbjct: 377 VLVAQRTYNEVQQEYLETMKGYAASLVALERACG 410