Pairwise Alignments

Query, 420 a.a., cation efflux system protein czcC (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 463 a.a., outer membrane efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 73.9 bits (180), Expect = 9e-18
 Identities = 91/410 (22%), Positives = 178/410 (43%), Gaps = 62/410 (15%)

Query: 36  LERNLSLIAERYNIDMAQAQVLQAK--LFENPVISLEQNVYNRLNGKYFDFGK--EGEAV 91
           L++N+++   R N +  Q  V  AK  LF +   S  QN+ NR    Y +  +   G  V
Sbjct: 52  LQQNITIRKNRVNAESTQIDVKTAKAALFPSLSFSTSQNMVNR---PYQESSRTISGSEV 108

Query: 92  VEIEQ--------------VIHLAGQRNKQVRLEKINKEIAEYQFEEVMRTLRQELNEKF 137
           +E                  I+   +R   ++ EK+N + A    E    ++++ + + +
Sbjct: 109 IETTSKTSYNGNYGLNASWTIYNGSKRLNTIKQEKLNNQAANLDVETSENSIQESIAQIY 168

Query: 138 VEVYFLSKSIAIYEKEVNSLQVLLGGMKIQQE---KGNISLMEISRLESMLFSLRKEKNE 194
           +++ + ++S+ + E   N+LQV +      QE    G+I+  ++++LE+ + + R +   
Sbjct: 169 IQILYAAESVKVNE---NTLQVSIAQRDRGQELLNAGSIAKSDLAQLEAQVSTDRYQLVT 225

Query: 195 RENDLLTTRGELNLLLNLPEDTQVQLSL----DEEVLQQLDLSQLSFADLKAIINERPDQ 250
            +  L   + +L  LL L  + ++ + L    DE VL  L   +  +     +   RP+ 
Sbjct: 226 AQATLQDYKLQLKQLLELDGENEMNVYLPALSDENVLLPLPTKKDVYMSALTL---RPEI 282

Query: 251 KIARSTVNASRANLKLQKSMAFPEFSVKGNY-------------DRVGNFINDYFAIGVS 297
           + ++ +V AS   + + K+   P  S+                 ++V N  N+  +IGVS
Sbjct: 283 EASKLSVEASELGIDIAKAGYLPTISLSAGIGTNHTSGSDFTFGEQVKNGWNN--SIGVS 340

Query: 298 LSVPIFNRNQGNIKAARFSIQQAGVQQEYAANRADMELFTAYTSLEKATQLYQSTNMDLE 357
           +SVPIFN  Q      + ++Q+A +Q+E +      E  T Y ++E    L+   N   +
Sbjct: 341 VSVPIFNNRQ-----TKSAVQKAKLQRETSLLSLLDEQKTLYKTIE---GLWLDANSAQQ 392

Query: 358 RNFEKLITGVNENFTRKNISLLEFIDYYDSYKETCIQLYEIKKNVFLAME 407
           R         NE      IS     + ++   +  ++L   K N+  A +
Sbjct: 393 R-----YAAANEKLRSTQISYDLISEQFNLGMKNTVELLTEKNNLLQAQQ 437