Pairwise Alignments

Query, 1035 a.a., putative cation efflux system (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1051 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  287 bits (734), Expect = 3e-81
 Identities = 245/1072 (22%), Positives = 490/1072 (45%), Gaps = 80/1072 (7%)

Query: 3    KFLIQRPIAVLMAFTACFIIGLVTYSTLPISLLPNIAIPEITVQVASANTSARELENTIV 62
            K  I+R   V++ FT   ++G+ +Y+ +   LLP  +   +TV       +  E+EN++ 
Sbjct: 5    KISIKRSTIVVVLFTILTLLGIFSYTQMSYELLPKFSPNVVTVSTVYPGAAPSEVENSVT 64

Query: 63   KPLRGQLIQVSTLKDIHSESRDGAGIIRLSFEYGTNTDLAFIEVNEKIDAAMNYLPKEAE 122
            + L   L  +  +  + S S +   II +  +   + DL   +    IDA +  LP++ +
Sbjct: 65   RKLEDALASLEGIDVMKSTSLESFSIITIELDDDVDVDLILQDAQRDIDAVLGDLPEDVD 124

Query: 123  RPKVIKASATDIPVFYLNLTLKNDSAYGATEQHSFLELCEFAESVIKRRIEQLEEVAMVD 182
             P + K S  D+P+  +          GA    +  +  +  +  I+  I Q++ VA V+
Sbjct: 125  PPSLGKFSLDDMPIMQM----------GAYSNLTATDFYDLMDQRIQPMISQIDGVAQVN 174

Query: 183  VTGILERQVQIVPDKDKLAMMGLSIGDIESALSSNNVEPGSMTVRDGYYEYNIKFSTLLR 242
            + G  ER++++  D++KL   G+S   +  A++  N++  +  ++    +  I+ +    
Sbjct: 175  LLGGAEREIKVNLDQNKLNTYGISPLQVNQAIAQANLDFPTGKLKSDKEQILIRLAGKFT 234

Query: 243  TAEDVENIYLRKGDRI-VQLKDFCKVSVVPVKEKGVSLSNGKRAVSLAVIKQADENMDKM 301
              +++  + +   D   +++KD  +V      E+ +S  NG  A+ +++ KQ+D N   +
Sbjct: 235  QVDEIGELIVSYADGSPIKIKDVAEVVDSNKDEEILSRLNGNSAIGISIQKQSDANAVDV 294

Query: 302  KQALVGTMTYFQLVYP--EIDFSISRNQTELLDYTISNLQQNLSLGFLFICLVAVLFLGD 359
             + +   +   +  Y   ++ F IS++ +E      + +  +L +  + + ++ +LFL  
Sbjct: 295  AERVNKALAQLETTYAGDDLRFEISQDSSEFTLEAANAVIHDLIIAVVLVAVIMLLFLHS 354

Query: 360  VKSPLVIGLSMVVSIVISFVFFYLCNMSLNIISLAGLILALGMMIDSSIIVTENISQYRE 419
             ++ +++ +++ +SI+ +F   YL   +LN++SL  L L +G+++D +I+V ENI ++ E
Sbjct: 355  FRNAVIVMIAVPMSIIATFTVMYLAGFTLNLMSLLALSLVVGILVDDAIVVIENIYRHME 414

Query: 420  RGYSLRRACVTGTSEVVTPMLSSSLTTIAVFAPLIFMSGIAGAIFFDQAFSVTVGLMVSY 479
            +G S  +A   G  E+   + S +L  + VF PL    G+   I    + +V V  M+S 
Sbjct: 415  KGKSAIQASYDGIREIGGTVTSITLVIVVVFVPLSMTGGLISGILTQFSITVAVATMMSL 474

Query: 480  LTGIMLLPVLYLLVYRTGVRTRKWKWLSFKFNNPIKDHTLDRFYDAGVDWV-------FR 532
            L    L+P+L         R  K + L  K       +  + F DA V W+       F 
Sbjct: 475  LVAFTLIPLL-------TSRFSKLEHLDPKSIFGKIVNGFEGFLDAFVAWLTGILKWSFN 527

Query: 533  HK--TFSVLFCVISIPLCVFFFFFIDKERMPDIEENELIARIEWNENIHVDENK--RRVD 588
            HK  T    F +      +  + FI  E +   ++ E I R+E  ++  ++E     R  
Sbjct: 528  HKIITLVATFVLFVSSFMLVGYGFIGSEFVSQGDKGEFIMRLELPKSATLEETNFTTREA 587

Query: 589  ELFKELKDEVLEQTASIGRQDFILNRER------ELSSSEAELYFRTETSNAIA-----S 637
            E F      V     ++G+    ++  +      E++    +   R  T+   A     +
Sbjct: 588  ENFLTKNPMVTSVFTTVGQTTGSMSGSQSTPYASEITVKMVDGKKRNLTAPEFAREMEIA 647

Query: 638  LEQAVYRKLKERYPLSVISFSPPETVFEKLFVTG-EPDVVAEFYTRNKAEAPKAEAIRSV 696
            LE+ +        P+ +   +    +  ++ ++G + D +  F  R  AE  K    R  
Sbjct: 648  LEENIVGAEFTAVPIGITGTANDAPI--QIVLSGPDLDTLKSFSQRVLAEVEKVPGTRKA 705

Query: 697  EQELGRKTGINPTGIAFENQLNLSISKEKLLLYRVSYNELYRVLKTAFRENSVTMLHSYQ 756
            +  L  + G NP       ++ + + + K+    +    +   ++ AF  N+ T      
Sbjct: 706  QTSL--EDG-NP-------EIRVEVDRAKMSDLGLDMAMVGGTMQVAFNGNTDTKYRDGD 755

Query: 757  QYLPINIAGDE---KTVNEVLQETLVQTQPDNRGNVDFIPLRELINVAPAED-------- 805
                INI  DE   K+V ++     V T+         + L++     P+E         
Sbjct: 756  YEYDINIRMDEFDRKSVADIENLAFVNTKGQT------VLLKQFAKAIPSEGPSELNRQD 809

Query: 806  -LKSITSGRNGEYVPFDFYGVQDANRLMREVKQVAEETGDWDTGFSGSIFSNKEMLDELV 864
             + S+T        P    G +   R+ +      +   +    + G +   +E    L 
Sbjct: 810  RITSVTVQSQVSGRPSGTVGTEIQERIAK-----LDLPKEVTVAYEGDMKMQEEGFGSLG 864

Query: 865  VILLISLLLMYFILAAQFESFLQPLLVLAEIPIDVAFALLLLWICGHTLNLMSAIGLIVT 924
            V LL S+LL+Y I+ A +++++ PL+V+  +P+ V  ALL L + G  L++ S +GLI+ 
Sbjct: 865  VALLASILLIYLIMVALYDNYVFPLVVMFSLPLAVIGALLALAMSGSALSIFSILGLIML 924

Query: 925  CGIVINDSILKLDAINELRKAGVPLLEAIHEAGRRRLRPIIMTSLTTIFAMVPLLFSSDM 984
             G+V  ++IL +D  N+L+ AG+ +  A+ +A   R RPI+MT+L  +F M+P+  +S  
Sbjct: 925  MGLVAKNAILLVDFTNQLKAAGLEVKAALVKAVEIRFRPILMTTLAMVFGMLPIALASGA 984

Query: 985  GSELQKPLSIAMIGTMSIGTAVSLFIIPLLYWFIYR--GKSGNHKPNEKHVE 1034
            G+E +  L+ A+IG +     +++ ++P++Y+   R   + G  K  E  +E
Sbjct: 985  GAEWKNGLAWALIGGLISSMFLTMVVVPVIYYIFDRILARFGKDKKEEIIIE 1036