Pairwise Alignments

Query, 1035 a.a., putative cation efflux system (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1029 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  268 bits (684), Expect = 2e-75
 Identities = 242/1047 (23%), Positives = 464/1047 (44%), Gaps = 86/1047 (8%)

Query: 13   LMAFTACFIIGLVTYSTLPISLLPNIAIPEITVQVASANTSARELENTIVKPLRGQLIQV 72
            ++A  A     +++   +P+ + P +  P I V       +  ++E  +        + +
Sbjct: 1    MVALLAIVFFAVLSIRNMPVDIFPKLGTPTIYVAQTYGGLAPNQIEGFMTSYYEYHFLYI 60

Query: 73   STLKDIHSESRDGAGIIRLSFEYGTNTDLAFIEVNEKIDAAMNYLPKEAERPKVIKASAT 132
            + +K++ S++  G  +++L+F  GT+   A  EV  +++ +  ++P     P + +    
Sbjct: 61   NGIKEVESKTIQGVSLMKLTFHEGTDMSQALAEVVAQVNRSRAFMPPGTVPPFITRFDGG 120

Query: 133  DIPVFYLNLTLKNDSAYGATEQHSFLELCEFAESVIKRRIEQLEEVAMVDVTGILERQVQ 192
              PV  L  +         +E  S  E+ + A   ++ +   +  V+     G  +R V 
Sbjct: 121  GAPVGQLVFS---------SESRSLGEIQDLALFKVRPKFASIPGVSAPPPFGGNQRTVL 171

Query: 193  IVPDKDKLAMMGLSIGDIESALSSNNVEPGSMTVRDGYYEYNIKFSTLLRTAEDVENIYL 252
            I  D  KL    +S  ++  A++  N    S  +R       +  +T++   +++ NI L
Sbjct: 172  IKADPSKLRSYNISPDELVMAIAKGNTISPSGNIRTADKLLIVNQNTVVSDIQELANIPL 231

Query: 253  RKGDR-IVQLKDFCKVSVVPVKEKGVSLSNGKRAVSLAVIKQADENMDKMKQALVGTMTY 311
            +KG    V ++D  +V        G +L NG R+V + V K+A  +   + + +  ++  
Sbjct: 232  KKGSGPAVYVRDVAEVQNGSDVASGYALINGSRSVYIPVTKRASASTWDVVRRIKASLPE 291

Query: 312  FQLVYPE-IDFSISRNQTELLDYTISNLQQNLSLGFLFICLVAVLFLGDVKSPLVIGLSM 370
             Q   P+ I  S   +Q+  +  ++  L     LG +   L+ +LFLGD +S L++ L++
Sbjct: 292  MQAAVPDDIKVSYEFDQSGYVINSLKTLSFEGILGAVLTGLMVLLFLGDRRSALIVILTI 351

Query: 371  VVSIVISFVFFYLCNMSLNIISLAGLILALGMMIDSSIIVTENISQYRERGYSLRRACVT 430
             ++I+ + V  YL   ++NI++L GL LA+G+++D S +  ENI +++E G +  RA + 
Sbjct: 352  PLAILSAIVCLYLTGQTINIMTLGGLALAIGILVDESTVTIENIHRHQEMGKTKTRAILD 411

Query: 431  GTSEVVTPMLSSSLTTIAVFAPLIFMSGIAGAIFFDQAFSVTVGLMVSYLTGIMLLPVLY 490
               E+  P L   ++ +AVF P  FMSG   A+F     +V   ++ S+L    ++P+L 
Sbjct: 412  ACKEIALPKLLILISILAVFVPSFFMSGTPRAMFLPLTLAVGFAMIASFLLSQTMVPILS 471

Query: 491  LLVYRTGVRTRKWKWLSFKFNNPIKDHTLDRFYDAGVDWVFRHKTFSVLFCVISIPLCVF 550
                +  V  +K      +F N +  +T       G  W         ++  + + +   
Sbjct: 472  NWFLKDHV-PQKEDGKFHRFRNRVTGYTKGITNKGG--WAIG------IYLAVIVAMLAS 522

Query: 551  FFFFIDKERMPDIEENELIARIEWNENIHVDENKRRVDELFKELKDEVLEQ------TAS 604
             + F   E  P +   +L  R+   +   + EN     + F E+ +EV+ +      +A 
Sbjct: 523  LWQFTGTEIFPKVNSGQLQVRLRMPDGTRI-ENTEEKTKQFLEVVNEVVGKENVEITSAF 581

Query: 605  IGRQ--DFILNRERELSSSEAELYFR---TETSNAIASLEQAVYRKLKERYPLSVISFSP 659
            +G Q   + +N     +    E   +    ET   +  L++ + +++ E  P   +SF P
Sbjct: 582  VGIQPPSYPVNTIFLWTGGPHEAVVKIKLKETGQDLDVLKETLRKRIAEAIPDMRLSFEP 641

Query: 660  PETVFEKLFVTGEPDVVAEFYTRNKAEAPK-AEAIRSVEQELGRKTGINPTGIAFENQLN 718
             + V + +       V      +N +E+ K AEAI+   + L     +       +  + 
Sbjct: 642  ADLVDQVMSQGANTSVEIAVQGKNLSESRKFAEAIKDRIEGLSFMRDV-------QFGIP 694

Query: 719  LSISKEKLLLYRVSYNELYRVLKTAFRENSVTMLHSYQQYLPINI-----AGDEKTVNEV 773
            L+     L   RV   +L   ++   R  SVT   S  ++   N      +G    V   
Sbjct: 695  LNYPSIDLEYDRVRAGQLGLTIEDISR--SVTASTSSSRFTQPNYWLDAGSGHAYQVQVE 752

Query: 774  LQETLVQTQPDNRGNVDFIPLRELINVAPAEDLKSITSGRNGEYVPFDFYGVQD------ 827
              + L+  QPD   +++ +PL+       +E+ K++ +G  G++ P    G  D      
Sbjct: 753  FPQYLID-QPD---DIERVPLK-------SENGKTVYAGDVGKWEPATMIGEYDRLNQQR 801

Query: 828  ----------------ANRLMREVKQVAEETGDWDTGFSGSIFSNKEMLDELVVILLISL 871
                               L  E+K + +        F G   +  +  +EL   LL+++
Sbjct: 802  FITITGNLHNKDLGGAIKTLRNELKAMGDPPAGMSVKFRGLAETLTQTFNELSTGLLLAV 861

Query: 872  LLMYFILAAQFESFLQPLLVLAEIPIDVAFALLLLWICGHTLNLMSAIGLIVTCGIVIND 931
             +++ +LAA F+SF     VL+ +P  +A + LL+WI G TLN+ S +G I+  G+ + +
Sbjct: 862  AVIFLLLAANFQSFRLSFAVLSTVPAVIAGSFLLIWISGSTLNIQSFMGSIMAIGVAVAN 921

Query: 932  SILKLDAINELRK--AGVPLLEAIHEAGRRRLRPIIMTSLTTIFAMVPLLFSSDMGSELQ 989
            +IL +    + RK     P LE I +    RLRPI+MT++  I  M P+      G E  
Sbjct: 922  AILFVTIAEQYRKDQRQNPHLEGIKD----RLRPILMTTIAMIAGMTPMALGLGEGGEQT 977

Query: 990  KPLSIAMIGTMSIGTAVSLFIIPLLYW 1016
             PL IA+IG +      ++F++P +YW
Sbjct: 978  APLGIAVIGGLLFSVFATVFMLPAIYW 1004