Pairwise Alignments

Query, 194 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 231 a.a., Ion-translocating oxidoreductase complex subunit E from Escherichia fergusonii Becca

 Score =  167 bits (423), Expect = 1e-46
 Identities = 86/195 (44%), Positives = 124/195 (63%), Gaps = 14/195 (7%)

Query: 6   VMMNGIIKENPIFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLIPDM 65
           V++ G+ K N   V LLG+CP L  TS+A N +G+GLAT  VL  +N+ IS++++  P  
Sbjct: 7   VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAE 66

Query: 66  VRIPSFIVVIASFVTLLQMIMQAYVPDLYATLGLFIPLIVVNCIVLGRAEAFAAKNNPLA 125
           +RIP ++++IAS V+ +QM++ AY   LY +LG+FIPLIV NCIV+GRAEAFAAK  P  
Sbjct: 67  IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPAL 126

Query: 126 SMFDGIGMGFGFTIALTLLGAVREFLGTG--------------KIFNLTILPEEYGMLIF 171
           S  DG  +G G T A+ +LG++RE +G G              K+  + I   +   L+ 
Sbjct: 127 SALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLA 186

Query: 172 VLAPGAFIALGYLIA 186
           +L PGAFI LG ++A
Sbjct: 187 MLPPGAFIGLGLMLA 201