Pairwise Alignments

Query, 194 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 227 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  127 bits (319), Expect = 1e-34
 Identities = 67/191 (35%), Positives = 111/191 (58%), Gaps = 10/191 (5%)

Query: 5   KVMMNGIIKENPIFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLIPD 64
           K++ + ++ +NPI + +LG+C  L  T+     + M L+ +FV++ SN+ IS ++N IP 
Sbjct: 25  KLISDPLVDDNPITIQVLGICSALAVTTQMKPTLVMALSVIFVIVMSNLTISIMRNTIPT 84

Query: 65  MVRIPSFIVVIASFVTLLQMIMQAYVPDLYATLGLFIPLIVVNCIVLGRAEAFAAKNNPL 124
            VRI   + V+A+ VTL+  I++A+  D+Y  L +F+ LI+ NCIV+GR EAFA  N P 
Sbjct: 85  RVRIIVQLAVVATLVTLVNEILKAFAYDMYKELSVFVGLIITNCIVMGRLEAFALGNKPY 144

Query: 125 ASMFDGIGMGFGFTIALTLLGAVREFLGTGKIFNLTILP-------EEYGML---IFVLA 174
            S+ DG G   G++  +  +   RE  G+G +F + +         E++ +    + V  
Sbjct: 145 DSVLDGFGSALGYSWIILTVAFFRELWGSGSVFGIPVFDTVSSWFGEDFSLATNGLMVSP 204

Query: 175 PGAFIALGYLI 185
            GAFI LG +I
Sbjct: 205 VGAFIILGLII 215