Pairwise Alignments

Query, 481 a.a., putative polysaccharide export protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 515 a.a., lipopolysaccharide biosynthesis protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  125 bits (315), Expect = 3e-33
 Identities = 87/427 (20%), Positives = 205/427 (48%), Gaps = 17/427 (3%)

Query: 1   MGKSLKSVFLSGTMWTAAENVIFTVLGIVQLAITSRILSSTDFGVYAIAVFFTGLGTIAF 60
           M K+L S  +SG  W +   +   V+ I   +  +R+L+   FG+ AIA      G+   
Sbjct: 1   MSKNLASKAVSGLKWGSVSTIANAVMQIGYTSAMARLLAPEAFGLVAIAGVILRFGSYFA 60

Query: 61  SMGLGPALVQKKGDIKDYLDTAWSANLLASIVATIVLEFLIFPICTYYYHNE----EGVL 116
            +GL  A++QK    ++ +  A++++ L  +  T+++ +++ P  T ++ NE    E V 
Sbjct: 61  HLGLSQAIIQKDELTEENIRAAFTSSALLGLAFTVLI-WVLAPFATLFFENEVYASEQVT 119

Query: 117 PSMVIM-LSVIFSAGQNPAIAYFQKEIKLKKYFYLKVFPKILSFVLVVVSVYYMK-SYWG 174
           P + +M L+++     + A +  ++ ++ K+   ++    ++S++ V + + Y+    W 
Sbjct: 120 PIVRLMSLALLIGGLSSTASSLCERNMRFKELSIVETLSYVISYLGVGIILAYLDYGVWS 179

Query: 175 LIIALLSEYLFRLIYSFFVYPYKVKFVIDKDKFYELYRFGGWLQLKNITSWFTTNIDVAI 234
           L+IA L++     + ++F+  + +  +   + +  L+ +G  + + +   + + ++   +
Sbjct: 180 LVIATLTQAALVALGAYFIARHSILPLFKWESYKPLFNYGSKMSVISFLEFLSQDMATIL 239

Query: 235 VGNVLGTASLGLYNRAQTIAGYPRTFVTGVIDNVAFPLYAQITDDKSRVDHVLSQIQNIV 294
           +G  LG   LG+Y+RA  +   P   +T  I  V FP ++++  + S++ +       ++
Sbjct: 240 IGKTLGPYKLGIYDRAHRLVNLPMYMLTRTISRVIFPSFSKLQAETSKLANAYISSTTLL 299

Query: 295 MYLLSMMCIVVVLYAKPIVLLVLGSTWVEMVEPFKIIFVSYVFQTLLFSFNPLLRAYGFT 354
             ++   C+ +++ A  +V ++LG  W + +   +++ ++     +      +  A    
Sbjct: 300 ATIIIPTCLGLLVAAPEVVYILLGDQWGDSIPVLQVLCLAIPLSFITMFAGIVCDA---- 355

Query: 355 KQEFRFYTIKMLVMIGLL---YPLTYWYGLIGAGISIL---LAVICVFPYLFYTIKKLTH 408
           K       +  LV IG++   + L   YGL+G   +IL   L  I  +  +   I KL++
Sbjct: 356 KAVLNLKIVLTLVFIGVITGFFFLLRQYGLVGFAFAILAGELVRILFYQTVLNRILKLSY 415

Query: 409 VELRQIF 415
               Q++
Sbjct: 416 TRQLQVY 422