Pairwise Alignments

Query, 367 a.a., putative ABC transporter ATP-binding protein or permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 368 a.a., ABC transport system, permease component YbhR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  162 bits (409), Expect = 2e-44
 Identities = 101/360 (28%), Positives = 188/360 (52%), Gaps = 2/360 (0%)

Query: 8   VKKEFYHIFRDRRTMLILLGMPVVQIILFGFAISTEVKNVRLAVLDPSNDVVTRKIIDRL 67
           ++KE   + R+ +T  IL+   ++Q+ILF FA + EV N  +A+ +  N   + ++  R 
Sbjct: 9   IRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYNEDNGKHSVELTQRF 68

Query: 68  DASEYFTVTTRFHSPQEMETAFRKNKIDMAIVFGERFADGLYTGD-ARVQLIVDATDPNM 126
             ++ FT     +SPQE++      K  + + F   F+  L T   A +QLI+D  + N 
Sbjct: 69  ARAKAFTHVLLLNSPQEIQPTIDTQKALLLVRFPADFSRNLDTFQPAPMQLILDGRNSNS 128

Query: 127 STSQSNYAASIVSSAGQEMLPPNVFVSRLTPDVKLLYNPQMKSAYNFVPGVMGLILMLIC 186
           +   +NY   IV    Q ++      +     V+  YNP +   +  VP ++ +I  +  
Sbjct: 129 AQIAANYLQQIVKEYQQTLMDGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGV 188

Query: 187 AMMTSISIVREKETGTMEVLLVSPVRPLFIVLAKAVPYFVLSFVNLTTILLLSVFVLDVP 246
            ++TS+S+ RE+E GT++ LLVSP+    I + KAVP  +++    T +L + ++   +P
Sbjct: 189 MIVTSLSVAREREQGTLDQLLVSPLTTWQIFVGKAVPALIVATFQATIVLAIGIWAYQIP 248

Query: 247 VVGSLFWLVMVSLLFIFVSLALGLLISSVTSTQVAAMLASGMILMMPTMVLSGMIFPVES 306
             GSL       +++    +  GLLISS+ +TQ  A +    + MMP ++LSG + PVE+
Sbjct: 249 FAGSLALFYFTMVIYGLSLVGFGLLISSLCATQQQAFIGV-FVFMMPAILLSGYVSPVEN 307

Query: 307 MPVILRAISDIIPARWYIQAVRKLMIEGVPVVLVLKEIGILLLMAVVLITISIRKFKYRL 366
           MPV L+ ++ I P R +    +++ ++   + +V   +  LL++A    + +   F+ ++
Sbjct: 308 MPVWLQNLTWINPIRHFTDITKQIYLKDASLGIVWGSLWPLLVIAATTGSAAYAMFRRKV 367