Pairwise Alignments

Query, 367 a.a., putative ABC transporter ATP-binding protein or permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 371 a.a., putative ABC transporter permease protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  172 bits (435), Expect = 2e-47
 Identities = 102/368 (27%), Positives = 200/368 (54%), Gaps = 18/368 (4%)

Query: 8   VKKEFYHIFRDRRTMLILLGMPVVQIILFGFAISTEVKNVRLAVLDPSNDVVTRKIIDRL 67
           ++KEF  + R+     ++L  P + ++L  +A++ E+KN++L ++D  + V+++++++++
Sbjct: 6   IEKEFKQLLRNSFLPRLILIFPCMIMLLMPWAVNLEIKNIQLNIVDNDHSVISQRLVNKI 65

Query: 68  DASEYFTVTTRFHSPQEMETAFRKNKIDMAIVFGE----RFADGLYTGDARVQLIVDATD 123
            AS YF +T     P   E   R  +   A +  E       D +  G+A + +  ++ +
Sbjct: 66  AASTYFRLT---EVPASYEDGLRNIEQGTADIIMEIPRHLERDWVNKGEAHILIAANSVN 122

Query: 124 PNMSTSQSNYAASIVSSAGQEM---LPPNVFVSRLTPDVKL----LYNPQMKSAYNFVPG 176
                  S+Y  +I+ +   E+    P  +  S   P +++    L+NP +      +P 
Sbjct: 123 GTKGGLGSSYLGTIIKNYAAELRAEYPDAISASGSAPSIRIDTQGLFNPNLNYKLYMIPA 182

Query: 177 VMGLILMLICAMMTSISIVREKETGTMEVLLVSPVRPLFIVLAKAVPYFVLSFVNLTTIL 236
           +MG++L LIC  + ++++V EKE GT+E + V+PV     +LAK +PY++  F+ LT   
Sbjct: 183 LMGMLLTLICGFLPALNVVSEKEVGTIEQINVTPVPKFTFILAKLLPYWITGFIVLTLCF 242

Query: 237 LLSVFVLDVPVVGSLFWLVMVSLLFIFVSLALGLLISSVTSTQVAAMLASGMILMMPTMV 296
           LL+  +  +  VG    +  +++LF+FV    GL+IS+ ++T   +M       M+  M+
Sbjct: 243 LLAWLLYGITPVGHFIVIYFLAILFVFVMSGFGLVISNYSATMQQSMFVM-FFFMLILML 301

Query: 297 LSGMIFPVESMPVILRAISDIIPARWYIQAVRKLMIEGVPVVLVLKEIGILLLMAVVLIT 356
           +SG+  PV SMP   + I+   P +++++ +R + ++G  ++ +L EIG+LLL A+   T
Sbjct: 302 MSGLFTPVSSMPEWAQVITYFNPLKYFMEGMRMVYLKGSSLLELLPEIGVLLLFALGFNT 361

Query: 357 ---ISIRK 361
              IS RK
Sbjct: 362 WAVISYRK 369