Pairwise Alignments

Query, 394 a.a., tryptophan synthase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 413 a.a., tryptophan synthase subunit beta from Pseudomonas simiae WCS417

 Score =  421 bits (1082), Expect = e-122
 Identities = 220/390 (56%), Positives = 277/390 (71%), Gaps = 4/390 (1%)

Query: 7   DQDGYYGEFGGAYVPEILHKCVEELKNTYLGVLESEDFKKEFDQLLRDYVGRPSPLYLAR 66
           D +G +G FGG YV E L   + +L   Y    E   FK+E     RDYVGRPSPLY A 
Sbjct: 13  DANGLFGAFGGRYVAETLMPLILDLAREYEAAKEDPAFKEELAYFQRDYVGRPSPLYFAE 72

Query: 67  RLSEKYG-CKMYLKREDLNHTGAHKINNTIGQILLARRMGKKRIIAETGAGQHGVATATV 125
           RL+E  G  K+YLKRE+LNHTGAHKINN IGQILLARRMGKKRIIAETGAG HGVATATV
Sbjct: 73  RLTEFCGGAKIYLKREELNHTGAHKINNCIGQILLARRMGKKRIIAETGAGMHGVATATV 132

Query: 126 CALMDMECIVYMGKTDVERQHINVEKMKMLGATVIPVTSGNMTLKDATNEAIRDWCCHPA 185
            A   ++C++YMG TD+ERQ  NV +MK+LGA VIPV +G  TLKDA NEA+RDW  +  
Sbjct: 133 AARFGLQCVIYMGTTDIERQQANVFRMKLLGAEVIPVVAGTGTLKDAMNEALRDWVTNVD 192

Query: 186 DTYYIIGSTVGPHPYPDMVARLQSVISEEIKKQLMEKEGRDHPDYLIACVGGGSNAAGTI 245
            T+Y+IG+  GPHPYP MV   Q+VI +E + QL  +EGR  PD L+AC+GGGSNA G  
Sbjct: 193 STFYLIGTVAGPHPYPAMVRDFQAVIGKETRDQLQAQEGR-LPDSLVACIGGGSNAMGLF 251

Query: 246 YHYINDGRVGIILAEAGGKGIETGMTAATIQLGKMGIIHGARTYVIQNEDGQIEEPYSIS 305
           + +++D  V II  EA G GIETG  AA++  G  G++HG RT+++Q++DGQI + +SIS
Sbjct: 252 HPFLDDQSVEIIGVEAAGHGIETGKHAASLNGGVPGVLHGNRTFLLQDDDGQIIDAHSIS 311

Query: 306 AGLDYPGIGPIHANLAAQRRATVLAVNDDEAIEAAYELTKLEGIIPALESAHALG-ALKK 364
           AGLDYPGIGP HA L    R    +V DDEA++A ++  +LEGIIPALESAHAL    K+
Sbjct: 312 AGLDYPGIGPEHAWLHDIGRVQYTSVTDDEALDAFHKCCRLEGIIPALESAHALAEVFKR 371

Query: 365 LKFKPED-VVVLTVSGRGDKDIETYLSFNE 393
               P+D ++V+ +SGRGDKD++T +   E
Sbjct: 372 APTLPKDHLMVVNLSGRGDKDMQTVMHHME 401