Pairwise Alignments

Query, 914 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 992 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  330 bits (845), Expect = 4e-94
 Identities = 261/931 (28%), Positives = 441/931 (47%), Gaps = 100/931 (10%)

Query: 32  IDSLITVGYATGSLKTISGSVEKITETQMNKDQITNPLEAIRGRVPGLTIQRGTNGPAAL 91
           +  ++ +GY T     ++GSV  +     NK  +++P E + G++ G+ I  G   P ++
Sbjct: 114 LSDVVIIGYGTQRKSDLTGSVASVGTKDFNKGMVSSPEELVNGKIAGVQIVNGGGSPTSV 173

Query: 92  DAVRLRGTTSLTSGNDPLIIVDGV--------FGDLSMLTSIYPTDIESFTILKDASETA 143
             +R+RG  SL + NDPLI++DGV         G  + L+ I P DIES T+LKDAS TA
Sbjct: 174 STIRIRGGASLNASNDPLIVLDGVPMEVGGSISGGGNFLSLINPNDIESMTVLKDASSTA 233

Query: 144 QYGSRGASGVIEITTKKGMSGKTQVSYNGIFGISTVYKNLKMLSADDFRRVASERGI--- 200
            YGSR ++GVI ITTKKG     +VS+     I+T  K   ML+ D+F  + ++ G    
Sbjct: 234 IYGSRASNGVIIITTKKGSGSDIKVSFQTTNSIATKTKTSDMLNTDEFINIVNQYGTEHQ 293

Query: 201 SILDKGNNTDFQKEIEQTGLQQNHHIAFYG-GSNESSYRVSLGFMDRQGVILNEDMKNFT 259
             L     T++  EI QT    +++++  G       +RVS G   + G++  ++ K FT
Sbjct: 294 KSLLGDYRTNWNDEIYQTAFGTDNNLSVSGLALPWLPFRVSTGMYYQDGILKTDNTKRFT 353

Query: 260 SNMNMTQRMFDGFLNCELGMFGSIQKNHNLVDLQKTFYSAATFNPTYPNHKDPDS-GSW- 317
            N+N+T   F   L   +G+ G+  KN    D     ++ +T NPT P +   D+ G + 
Sbjct: 354 GNVNLTPSFFHNELRFNIGLKGTYSKN-RFADTD-AIWAGSTLNPTIPVYSGNDTFGGYN 411

Query: 318 -----DGITTASQITNPLAWMEVQDHDATSHI-----STHARLTFNLMDELKLVLFGAYT 367
                +G+     + N +    +  +D+TS +     S         +  L+L   G Y 
Sbjct: 412 EAIDANGVPVTGALANAVG--RLNQYDSTSDVYRFIGSASVDWNVRWVKGLRLHTTGGYD 469

Query: 368 YNIIENSQYLPTSVWAH----GQAYK-GTKKMESLLGNMMLTYKKGWKKHYFDALALAEL 422
           ++  +   Y+P    ++    G+ Y  G +K  + L  +   Y        FDA+     
Sbjct: 470 WSKGKGHIYVPKEAVSYYTTGGRDYTYGPQKNYNKLLTIYANYHND-----FDAIHSGID 524

Query: 423 QKETYT-GFYTTVTNFNTDKFGYHNLQAGALRPWEGTNSYYEQPH-LASFMGRFNYTYAD 480
               Y   F+   T F      Y  L A  ++  + T++  +Q H L S+ GR NYT+ D
Sbjct: 525 VTVGYDYQFWKYTTPF------YAILSADGVQ--QSTSAATDQRHSLMSYYGRLNYTFMD 576

Query: 481 RYSLTMTARTDASSKFGANHKWGFFPSVSAAWVISEEKFMKRL-PVIDNLKFRIGYGLAG 539
           RY L  T R D SS+F ++++WG FPSV+ AW +S+E F + L  V++++K R+ YG+ G
Sbjct: 577 RYLLMATMRRDGSSRFASDNRWGTFPSVALAWRVSQEHFFEPLRTVMNDVKLRVSYGITG 636

Query: 540 NQSGIDSYTTLSLVKP--NGVIPVGNSAAVSLGDLRNTNPDLKWEVKHTFNTGIDLAMFG 597
            Q GI +Y  + +  P  +G   +     +        NP+LKWE   ++N GIDLA   
Sbjct: 637 QQDGITNYGYIPVYTPGLDGAQYLFGGNPIYTYRPEAYNPELKWETTKSWNYGIDLAFLE 696

Query: 598 NRLLLSANYYNSKTTDMLYLYNVSVPPFTYNTLLANIGSMRNSGLEIAIGITPLKTQDME 657
           NR   SA++Y  KT ++L    +         +L N+G++ + GLE+++    + T++  
Sbjct: 697 NRFTFSADFYTRKTENLLATVPMPAGTNFDKLMLQNVGNVDSKGLELSVTGHIINTKNWS 756

Query: 658 LNINANITFQQNKLLSLS---GMYNGELISAPEYKSLASLDGAGFHGGYNHIVYQVV--- 711
              +AN  +Q+ ++ +L+   G  + +    P   +      +  +  Y+  +Y+ +   
Sbjct: 757 WTASANAAWQKVRIKNLTLTPGAPSPDTEVGPWIDAYQMQVFSTDYAPYSFYLYKQLYDA 816

Query: 712 --GQPLGVFYLPRANGLVSDGNGGYTYDIADLNGGGVSLEDGEDRYVAGQAVPKTILGSN 769
             GQP+   Y                   ADL+G G      +DRY      P  ILG +
Sbjct: 817 ETGQPIEGLY-------------------ADLDGDGEI--TNKDRYHHHSPAPDWILGFS 855

Query: 770 LSFRYKRFDISVQINGAFGHKIYNGTSLT-----YMNMNIFPDYNVMQE-APARNIKDQT 823
            S RYK++ +S  +    G  I+NG ++       M+ N +   N+ +     R  K Q 
Sbjct: 856 TSLRYKKWTLSTSLRANIGGYIFNGMAMNTGAWETMSYNDYQLNNLNRSFLDTRFTKRQF 915

Query: 824 ATDYWLENGAYVNFDYVTLGWNVPIEKVQKLKKYVRSLRLAFTVNNLATISGYSGLSPMI 883
            +D++LEN +++  D + L ++       ++ K +  L  +  V N+ T++ Y G+ P  
Sbjct: 916 LSDHYLENASFLKMDNLQLSYD-----FGRIYKTI-GLHASAMVQNVFTVTKYKGVDP-- 967

Query: 884 NSSTVNSTLGLDDKRGYPLARTYTLGLSINF 914
              T N      D   YP  RTY++ + +NF
Sbjct: 968 --ETANGV----DTSVYPRPRTYSITIGLNF 992