Pairwise Alignments

Query, 914 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1003 a.a., SusC, outer membrane protein involved in starch binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  350 bits (897), Expect = e-100
 Identities = 272/952 (28%), Positives = 438/952 (46%), Gaps = 121/952 (12%)

Query: 32   IDSLITVGYATGSLKTISGSVEKITETQMNKDQITNPLEAIRGRVPGLTIQRGTNGPAAL 91
            +D ++ +GY       ++GSV  I   +++K   TN  + + G++ G+++      P   
Sbjct: 104  LDEVVVIGYGQVKKNDMTGSVMAIKPDELSKGITTNAQDMLSGKIAGVSVISNDGTPGGG 163

Query: 92   DAVRLRGTTSLTSGNDPLIIVDG-------VFGDLSMLTSIYPTDIESFTILKDASETAQ 144
              +R+RG +SL + NDPLI++DG       + G  + L+ + P DIE+ T+LKDAS TA 
Sbjct: 164  AQIRIRGGSSLNASNDPLIVIDGLAIDNEGIKGMANGLSMVNPADIETLTVLKDASATAI 223

Query: 145  YGSRGASGVIEITTKKGMSGKT-QVSYNGIFGISTVYKNLKMLSADDFRRVASERGISIL 203
            YGSR ++GVI ITTKKG +G+   VSYNG    S   K   +LS D++R  A++     L
Sbjct: 224  YGSRASNGVIIITTKKGKNGQAPSVSYNGSVSFSKTQKRYDVLSGDEYRAYANQLWGDKL 283

Query: 204  --DKGN-NTDFQKEIEQTGLQQNHHIAFYGGSNESSYRVSLGFMDRQGVILNEDMKNFTS 260
              D G  NTD+Q +I +T +  +HH++  GG     YRVSLG+ D  G++   + + FT+
Sbjct: 284  PADLGTANTDWQDQIFRTAVSTDHHVSINGGFKNLPYRVSLGYTDDNGIVKTSNFRRFTA 343

Query: 261  NMNMTQRMFDGFLNCELGMFGSIQKNHNLVDLQKTFYSAATFNPTYPNHKDPD-----SG 315
            ++N+    F+  L   +       KN    D       A   +PT P + + D      G
Sbjct: 344  SVNLAPSFFEDHLKFNINAKFMNGKNR-YADTGAAIGGALAIDPTRPVYSNEDPYQFTGG 402

Query: 316  SWDGITTASQITNP--------------LAWMEVQDHDATSHI---STHARLTFNLMDEL 358
             W  I + +  +NP              LA +E+++  A S+    +      F+ + +L
Sbjct: 403  YWQNINSTTGFSNPDWKYTSNPNSPQNPLAALELKNDKANSNDFVGNVDVDYKFHFLPDL 462

Query: 359  KL--VLFGAYTYNIIENSQYLPTSVWAHGQAYKG-----TKKMESLLGNMMLTYKKGWKK 411
            +L   + G Y     E +Q    S ++ G  Y G     T+   +L  N+ + Y K    
Sbjct: 463  RLHASIGGEYA----EGTQTTIVSPYSFGNNYYGWNGDVTQYKYNLSYNIYVQYIKSLGA 518

Query: 412  HYFDALALAELQKETYTGFYTTVTNFNTDKFGYHNLQAGALRPWEGTNSYYEQPH----- 466
            + FD +   E Q     GF                         +G +SY ++PH     
Sbjct: 519  NDFDIMVGGEEQHFHRNGF----------------------EEGQGWDSYTQEPHDAKLR 556

Query: 467  ----------LASFMGRFNYTYADRYSLTMTARTDASSKFGANHKWGFFPSVSAAWVISE 516
                      L S+ GR NY+  +RY  T T R D SS+F  +++WG FPS++  W I E
Sbjct: 557  EQTAYATRNTLVSYFGRLNYSLLNRYLFTFTMRWDGSSRFSKDNRWGTFPSLALGWKIKE 616

Query: 517  EKFMKRLPVIDNLKFRIGYGLAGNQSGIDSYTTLSLVKPN---GVIPVGNSAAVSLGDLR 573
            E F+K + V+ +LK R+G+G+ G Q+  D +  L L   N      P G++   S    +
Sbjct: 617  ENFLKDVNVLSDLKLRLGWGITGQQNIGDDFAYLPLYVVNNEYAQYPFGDT-YYSTSRPK 675

Query: 574  NTNPDLKWEVKHTFNTGIDLAMFGNRLLLSANYYNSKTTDMLYLYNVSVPPFTYNTLLAN 633
              N +LKWE   T+N G+D      R+    + Y  KT D+L    + V       +  N
Sbjct: 676  AFNENLKWEKTTTWNAGLDFGFLNGRITGGIDGYFRKTDDLLNSVKIPVGTNFNAQMTQN 735

Query: 634  IGSMRNSGLEIAIGITPLKTQDMELNINANITFQQNKLLSLSGMYNGE-LISAPEYKSLA 692
            IGS+ N G+E +I   P+ T+D   +++ NIT+  N++  L+G  + +  + A +  S  
Sbjct: 736  IGSLENYGMEFSINAKPIVTKDFTWDLSYNITWNHNEITKLTGGDDSDYYVEAGDKIS-- 793

Query: 693  SLDGAGFHGGYNHIVYQVVGQPLGVFYLPRANGLVSDGNGGYTYDI-ADLNGGGVSLEDG 751
                    G    +    VG     FY+ +    V D NG    ++  D NG G    D 
Sbjct: 794  -------RGNNTKVQAHKVGYAANSFYVYQQ---VYDENGKPIENMFVDRNGNGTI--DS 841

Query: 752  EDRYVAGQAVPKTILGSNLSFRYKRFDISVQINGAFGHKIYNGTSLTYMNMN---IFPD- 807
             D+Y+  +     ++G     +YK FD S  +  +  + +Y        N++   +F + 
Sbjct: 842  GDKYIYKKPAGDVLMGLTSKMQYKNFDFSFSLRASLNNYVYYDFLSNKANVSTSGLFSNN 901

Query: 808  --YNVMQEAPARNIKDQ--TATDYWLENGAYVNFDYVTLGWNVPIEKVQKLKKYVR-SLR 862
               N   EA A  +  Q    +DY++ N +++  D +TLG++   + + K + Y     R
Sbjct: 902  AYSNTSAEAVALGLSGQGDYMSDYFIHNASFLRCDNITLGYS--FQNLWKTQTYKGVGGR 959

Query: 863  LAFTVNNLATISGYSGLSPMINSSTVNSTLGLDDKRGYPLARTYTLGLSINF 914
            +  TV N   IS Y GL P + S          D   YP A T+ LGLS+ F
Sbjct: 960  VYATVQNPFIISKYKGLDPEVKSGI--------DANPYPRAMTFLLGLSLQF 1003