Pairwise Alignments

Query, 914 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1061 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  318 bits (814), Expect = 1e-90
 Identities = 266/982 (27%), Positives = 434/982 (44%), Gaps = 136/982 (13%)

Query: 32   IDSLITVGYATGSLKTISGSVEKIT-ETQMNKDQITNPLEAIRGRVPGLTIQRGTNGPAA 90
            +D ++ +GY T     +SGSV  ++ + +     IT+  + ++GR+ G++I   +  P A
Sbjct: 117  LDEVVVIGYGTVRKSDLSGSVSAVSMKNEAEIMPITSADQFLQGRIAGVSIAANSGAPGA 176

Query: 91   LDAVRLRGTTSLTSGNDPLIIVDG---------VFGDLSMLT---------SIYPTDIES 132
               +++RG ++L+   DPL +VDG         V G  S L+         SI P DIES
Sbjct: 177  GMNIQIRGVSTLSGNTDPLYVVDGFPIEAATASVNGGTSELSQQPAMNPLASINPNDIES 236

Query: 133  FTILKDASETAQYGSRGASGVIEITTKKGMSGKTQVSYNGIFGISTVYKNLKMLSADDFR 192
              +LKDAS TA YGSR  +GVI ITTK+G  GK  V+YN    IS + K   +L+A D+ 
Sbjct: 237  IQVLKDASATAIYGSRATNGVILITTKQGKEGKVNVNYNARVDISNISKRYNLLNAHDYA 296

Query: 193  RVASERGISILDKGNN-----------------------------TDFQKEIEQTGLQQN 223
               +E     LD+ +N                             TD+Q  + QT + Q+
Sbjct: 297  LFENE-----LDRTSNGYDMQGNVIPSTKVPRHTDDALERYKIYSTDWQDLMYQTAVSQD 351

Query: 224  HHIAFYGGSNESSYRVSLGFMDRQGVILNEDMKNFTSNMNMTQRMFDGF---LNCELGMF 280
            H +A  GG+  + Y ++ G+ D++G+I+N  ++ ++  +N+   +       LN      
Sbjct: 352  HQLAVNGGNKMTQYNITAGYTDQEGIIMNTGLERYSFRLNLKSELAKRLVLQLNTSYSQT 411

Query: 281  GSIQKNHNLVDLQKTFYSAATFNPTYPNHKDPDSGSWDGITTASQITNP-LAWMEVQDHD 339
               Q +H+                T P     D    D         NP +   E++D  
Sbjct: 412  EQKQTSHSQSSSMNQMVRRIL--TTKPTLMPGDQIYEDENVEYVPADNPYIMATELKDIL 469

Query: 340  ATSHISTHARLTFNLMDELKLVLFGAYTYNIIENSQYLPTSV----WAHGQAYKGTKKME 395
                   +A LT+N    L     G++       S Y P        AHG A++G    +
Sbjct: 470  QQRFFILNASLTYNFGKGLSWKGAGSFNRTDGSRSTYYPIGTNAGNSAHGMAFRGEDNRQ 529

Query: 396  SLLGNMMLTYKKGWKKHYFDALALA----ELQKETYTGFYTTVTNFNTDKFGYHNLQAGA 451
            +++    + Y + +KKH+     L     + Q++T       V +F  +   Y+ +    
Sbjct: 530  NIVLETTVNYDRKFKKHHHINAVLGYTHEDRQRKTLA---IQVGDFAGNDLLYYAIG--- 583

Query: 452  LRPWEGTNSYYE-----QPHLASFMGRFNYTYADRYSLTMTARTDASSKFGANHKWGFFP 506
                EGTN+  +     Q  L+SF+GR NYT  DRY  T T R D SS   + ++W FFP
Sbjct: 584  ----EGTNTMDKSSSVIQTKLSSFLGRMNYTLYDRYIFTATGRYDGSSLLASGNRWSFFP 639

Query: 507  SVSAAWVISEEKFMKRLPVIDNLKFRIGYGLAGNQSGIDSYTTLSLVKPNGVIPVGNSAA 566
            S + AW I++EKFMK +P I N+K R+ YG+ GNQS   +Y     +  +     G +  
Sbjct: 640  SFAVAWRINQEKFMKDIPAISNIKLRLSYGVTGNQS--IAYAAPLAIMNHVRSYSGGAVT 697

Query: 567  VSLGDLRNTNPDLKWEVKHTFNTGIDLAMFGNRLLLSANYYNSKTTDMLYLYNVSVPPFT 626
              + + +  NP+L WE   T+N G+DL    NR  ++ N Y   T DML  + + +    
Sbjct: 698  HGMVNGKLANPNLGWESTATYNAGLDLGFIDNRFRVTMNVYQRTTKDMLMNFGLPLSS-G 756

Query: 627  YNTLLANIGSMRNSGLEIAIGITPLKTQDMELNINANITFQQNKLLSLSGMYNGELISAP 686
            Y ++  N+G M N G E+      + T  ++  +  NI   +NK+  +SG    EL+   
Sbjct: 757  YGSIPYNMGKMTNKGFELEAS-ADILTGRVKWTLGGNIYLNRNKVDDISG---NELLGT- 811

Query: 687  EYKSLASLDGAGFHGGYNHIVYQVVGQPLGVFYLPRANGLVSDGNGG--YTYDIADLNGG 744
                 + L G G      HI     G P+G FY    +G+  +        +D      G
Sbjct: 812  -----SYLAGGGVFSQSIHIT--KAGYPVGSFYGYVVDGVYQNEAEAKLAPFDTPQATPG 864

Query: 745  GVSLED-------------GEDRYVAGQAVPKTILGSNLSFRYKRFDISVQINGAFGHKI 791
             +  +D              +D  + G A PK   G N    +K   +S+   G  G  I
Sbjct: 865  SLRFKDISGPDGLPDGKITSDDMTIIGTAEPKFNYGINSELSWKGLTLSMIFTGRVGGDI 924

Query: 792  YNGT-----SLTYMNMNIFPD--------------YNVMQEAPARNIKDQTATDYWLENG 832
             N       S T  N NI  +              Y  +  +   +  ++  + + LE+G
Sbjct: 925  ANLNRYFLDSFTDTNDNIRAEAWEGRWQGEGTSNFYPAVNGSQGSSYFNKRFSTFLLEDG 984

Query: 833  AYVNFDYVTLGWNVPIEKVQKLKKYVRSLRLAFTVNNLATISGYSGLSPMINSSTVNSTL 892
            ++     +TL +   ++K+    +++RS+R+  TV N+ TI+ YSG  P + S T  +  
Sbjct: 985  SFFRLKNLTLAYQFSLKKL----RWLRSVRVFGTVTNVFTITNYSGYDPEV-SITSGAMS 1039

Query: 893  GLDDKRGYPLARTYTLGLSINF 914
               D   YP +RTY++G+++ F
Sbjct: 1040 PNVDYAAYPSSRTYSMGINLAF 1061