Pairwise Alignments

Query, 914 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 999 a.a., TonB-dependent receptor for dextran (SusC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  317 bits (813), Expect = 2e-90
 Identities = 264/951 (27%), Positives = 447/951 (47%), Gaps = 128/951 (13%)

Query: 32  IDSLITVGYATGSLKTISGSVEKITETQMNKDQITNPLEAIRGRVPGLTIQRGTNGPAAL 91
           +D ++ VGY T     ++G+V  +    +    + N  +A++G+V G+ I      P   
Sbjct: 109 LDEVVVVGYGTMKKSDLTGAVSSVGVKDIKDSPVANIGQAMQGKVSGVQII-DAGKPGDN 167

Query: 92  DAVRLRGTTSLTSGNDPLIIVDGVFGDLSMLTSIYPTDIESFTILKDASETAQYGSRGAS 151
             +++RG  ++ + N PL+++DG+  DL  L+S+   D+E   +LKDAS TA YGSRGA+
Sbjct: 168 VTIKIRGLGTINNSN-PLVVIDGIPTDLG-LSSLNMADVERVDVLKDASATAIYGSRGAN 225

Query: 152 GVIEITTKKGMSGKTQVSYNGIFGISTVYKNLKMLSADDFRRVASERGISILDK------ 205
           GV+ IT+K+G  G  +V+ N  + I    K   ML+A  +  ++++   +  D       
Sbjct: 226 GVVMITSKRGAEGAGKVTVNANWAIQNATKVPDMLNAAQYAALSNDMLSNNDDNTNPYWA 285

Query: 206 -----GNNTDFQKEIEQTGLQQNHHIAFYGGSNESSYRVSLGFMDRQGVILNEDMKNFTS 260
                G  T++  E+ +TG++Q++ +++ GG+ ++ Y VS GF+D+ G++ + + + F  
Sbjct: 286 DPSSLGKGTNWLDEMLRTGVKQSYSVSYSGGTEKAHYYVSGGFLDQSGIVKSVNYRRFNF 345

Query: 261 NMNMTQRMFDGFLNCELGMFGSIQKN---HNLVDLQKTFYSAATFNPTYPNHKDPDSGSW 317
             N   ++           F +  K    +++ D  K         PT P   D   GSW
Sbjct: 346 QANSDAQVNKWLKFTTNLTFSTDVKEGGTYSIGDAMKAL-------PTQPVKND--DGSW 396

Query: 318 DGITTASQ----ITNPLAWMEVQDHDATSH---ISTHARLTFNLMDELKLVLFGAYTYNI 370
            G    +Q    I NP+  + +  ++   +    +    +TF    +LK   FG Y    
Sbjct: 397 SGPGQEAQWYGSIRNPIGTLHMMTNETKGYNFLANITGEITFTKWLKLKST-FG-YDAKF 454

Query: 371 IENSQYLPTSVWA-----HGQAYKGTKKMESLLGNMMLTYKKGW-KKHYFDALALAELQK 424
                + P   W          YK   K  + L +    +   + KKH    +A +  Q 
Sbjct: 455 WFADNFTPAYDWKPNPVEESSRYKSDNKSFTYLWDNYFVFDHTFAKKHRVGVMAGSSAQW 514

Query: 425 ETYTGFYTTVTNFNTDKFGYHNLQAGA-LRPWEGTNSYYEQPHLASFMGRFNYTYADRYS 483
             Y         F  D    H +  G  +    G+ S +    L S M R NY+Y D+Y 
Sbjct: 515 NNYDYLNAQKNIFMFDNI--HEMDNGEKMYSLGGSQSDWA---LLSLMARLNYSYEDKYL 569

Query: 484 LTMTARTDASSKFGANHKWGFFPSVSAAWVISEEK-FMKRLPVIDNLKFRIGYGLAGNQS 542
           LT T R D SS+FG N++WG FPSVS AW +S+E  F K   ++++LK R+GYG+ GNQ 
Sbjct: 570 LTATVRRDGSSRFGKNNRWGTFPSVSLAWRVSQEDWFPKDNFLMNDLKLRVGYGVTGNQE 629

Query: 543 GIDSYTTLSLVKPNGVIPVGNSAAVSLGDLRNTNPDLKWEVKHTFNTGIDLAMFGNRLLL 602
            I +Y  ++     GV P GN+ + +L     +NP++ WE     N G+D+++F +R+ L
Sbjct: 630 -IGNYGFVASYN-TGVYPFGNNNSTALVSTTLSNPNIHWEEVRQANFGVDMSLFDSRVSL 687

Query: 603 SANYYNSKTTDMLYLYNVSVPPFTYNT--LLANIGSMRNSGLEIAIGITPLK-TQDMELN 659
           S + Y   T DML   ++ +     +T     N G MRN G+E+ +    LK     E  
Sbjct: 688 SLDAYIKNTNDMLVKASIPITSGFEDTTETFTNAGKMRNKGVEMTLRTINLKGIFSWESA 747

Query: 660 INANITFQQNKLLSLSG---MYNGELISAPEYKSLASLDGAGFHGGYNHIVYQVVGQPLG 716
           + A  T+ +N++L L+    M+  ++                   G +++     G P+ 
Sbjct: 748 LTA--TYNKNEILDLNSETPMFINQI-------------------GNSYVTMLKAGYPIN 786

Query: 717 VFYLPRANGLVSDG--------------NGGYTYDI--ADLNGGGVSLEDGEDRYVAGQA 760
           VFY     G V+DG               G    DI   DLN  GV   + EDR + G  
Sbjct: 787 VFY-----GYVTDGLFQNWGEVNRHATQPGAAPGDIRFRDLNNDGVI--NDEDRTILGNP 839

Query: 761 VPKTILGSNLSFRYKRFDISVQINGAFGHKIYNGTSLTYMNMNIFPDYNVMQEAPARNIK 820
            P      + +  YK +++SV + G  G+KIYN  ++   N  +   YN       R   
Sbjct: 840 NPNWFFSLSNNLSYKGWELSVFLQGVAGNKIYNANNVD--NEGMAAAYNQTTAVLNRWTG 897

Query: 821 DQTA-----------------TDYWLENGAYVNFDYVTLGWNVPIEKVQKLKKYVRSLRL 863
           + T+                 +D ++ENG+Y+    +TL + +P + +QK++  + + R+
Sbjct: 898 EGTSYSMPRAIWGDPNQNCRVSDRFVENGSYLRLKNITLSYTLPKKWLQKIQ--LENARI 955

Query: 864 AFTVNNLATISGYSGLSPMINSSTVNSTLGLDDKRGYPLARTYTLGLSINF 914
           +F+  N+ATI+ YSG  P ++ +      G+D  R YP++RT+++GL+ NF
Sbjct: 956 SFSCENVATITRYSGFDPEVDVN------GIDSSR-YPISRTFSMGLNFNF 999