Pairwise Alignments

Query, 914 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1021 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  318 bits (816), Expect = 8e-91
 Identities = 261/949 (27%), Positives = 422/949 (44%), Gaps = 98/949 (10%)

Query: 32   IDSLITVGYATGSLKTISGSVEKITETQMNKDQITNPLEAIRGRVPGLTIQRGTNGPAAL 91
            ++ ++ +GY T     +SG+V  ++  ++N    +N   A++G++PG+++   +  P   
Sbjct: 103  LEQVVVIGYGTVKKSHLSGAVGSVSAKELNGQVASNAATALQGKIPGVSVASSSGDPNGS 162

Query: 92   DAVRLRGTTSLTSGNDPLIIVDGVFGDLSMLTSIYPTDIESFTILKDASETAQYGSRGAS 151
              + +RG +SL S N+PL +VDG FGD+SM+    P DI S  +LKDA+  A YGSR A 
Sbjct: 163  MTINVRGISSL-SNNNPLYVVDGAFGDISMVD---PNDISSIEVLKDAAAAAIYGSRAAG 218

Query: 152  GVIEITTKKGMSGK-TQVSYNGIFGISTVYKNLKMLSADDFRRVA-----------SERG 199
            GV+ ITTK G     T++  N   G+S   K LK+ + +++ R A           +E G
Sbjct: 219  GVVLITTKSGRKDMPTKLDVNFFTGVSQTPKTLKVFNGEEYSRFARYYKLAGDGYGAENG 278

Query: 200  ISILDKGNNTDFQKEIEQTGLQQNHHIAFYGGSNESSYRVSLGFMDRQGVILNEDMKNFT 259
             +    G  TD+Q  + +T +    +    GGS   SY  S+ +++++G++ N D +++ 
Sbjct: 279  ATPFI-GEGTDWQDVMLRTAMTYKANATISGGSKNGSYSSSVSYLNKEGILRNTDHESYN 337

Query: 260  SNMNMTQRMFDGFLNCELGMFGSIQKNHNLVDLQKTFYSAATFNPTYPNHKDPDSGSWDG 319
              +      FD  L     M  ++ K    +  Q T +    F    P +   ++G W G
Sbjct: 338  IRLKSDYSFFDNRLTIGESMIVNLTKGSGYIH-QDTMFDIFQFPSVVPVYDPTNAGGW-G 395

Query: 320  ITTASQITNPLAWMEVQDHDA-TSHISTHARLTFNLMDELKLVLFGAYTYNIIENSQYLP 378
             +    + NPLA M V D    T+ I  +A L   ++  LK      Y  N+    ++  
Sbjct: 396  TSNDINLPNPLAEMTVNDERTETTKIFLNAYLQAEIIKGLK------YKLNVGIRKEHTK 449

Query: 379  ----TSVWAHGQAYKGTKK--------MESLLGNMMLTYKKGWKKHYFDALALAELQKET 426
                  V+  G   K  K          ES +    L Y + + KH    LA    QK+ 
Sbjct: 450  WRYYKDVYDLGTFGKNDKPDLEEKSSTWESWVLENTLNYDRTFGKHNLSLLAGYSAQKDK 509

Query: 427  YTGFYTTVTNFNTDKFGYHNLQAGALRPWE-GTNSYYEQPHLASFMGRFNYTYADRYSLT 485
                Y      N D   +     G + P     +S   +  L S  GR  Y++ DRY  +
Sbjct: 510  SYSLYGK----NGDMPQFIETMPGNVDPSNLKASSSLNELALVSLFGRVMYSFDDRYLFS 565

Query: 486  MTARTDASSKFGANHKWGFFPSVSAAWVISEEKFMKRLP-VIDNLKFRIGYGLAGNQSGI 544
             + R D SS+F + H++G FPS S  W I+ EKF K L  V D LK R  YG  GNQ   
Sbjct: 566  ASIRRDGSSRFRSGHQYGAFPSASIGWNINREKFFKPLENVFDQLKLRFSYGKLGNQEMT 625

Query: 545  DSYTTLSLVKPNGVIPVGNSAAV-SLGDLRNTNP-DLKWEVKHTFNTGIDLAMFGNRLLL 602
              Y T S+V       + NS    S+  ++  +P +L WE   T+N G+D+++   RL L
Sbjct: 626  SYYPTQSVVSDGMNYVMNNSPWFGSMPYVQAISPANLTWENTETYNIGLDVSLLNGRLTL 685

Query: 603  SANYYNSKTTDMLYLYNVSVPPFTYNTLLANIGSMRNSGLEIAIGITPLKTQDMELNINA 662
            +A+ Y   T D+L     +         + N G +RN G E+A+       +     I A
Sbjct: 686  TADAYVKNTNDVLLPIPSTASTGISGNSIQNAGQVRNKGFELAVNYRGAIKEKFNYYIGA 745

Query: 663  NITFQQNKLLSLSGMYNGELISAPEYKSLASLDGAGFHGGYNHIVYQVVGQPLGVFYLPR 722
            NI   +N++  ++    G+ +    Y    S  GAG  G    I     G P+  F L  
Sbjct: 746  NIAADKNEVTKIT--LGGQNLMISGY----SAHGAGGRG----INMFAEGHPMSYFNLIE 795

Query: 723  ANGLVSDGNGGYTY---------------DIADLNGGGVSLEDGEDRYVAGQAVPKTILG 767
             +GL         Y               D+   +  G    + +D++  G   P    G
Sbjct: 796  TDGLFRSAEEIANYKNKDGELIQPAAQVGDVRYKDWNGDGKINTDDQHDVGSPFPDFTFG 855

Query: 768  SNLSFRYKRFDISVQINGAFGHKIY------------NGTSLTYMNMNIFPDYNVMQEAP 815
              L   +  FD ++  +G  G+KIY            NG   T +  +  PD N   + P
Sbjct: 856  IRLGGEWNNFDFNLFFDGMVGNKIYNYPRYRLESGNFNGNMSTVLANSWRPD-NQNTDIP 914

Query: 816  ARNIKD-----QTATDYWLENGAYVNFDYVTLGWNVPIEKVQKLKKYVRSLRLAFTVNNL 870
              +  D        TD WLE+G+Y+    + +G+ +P    +K+K  + ++R+  ++ NL
Sbjct: 915  RFSKTDGADNKWAYTDRWLEDGSYIRLKTLDIGYTLPKVLTKKIK--LENVRIYTSMENL 972

Query: 871  ATISGYSGLSPMINSSTVNS------TLGLDDKRGYPLARTYTLGLSIN 913
             T++ YSG +P +  S+V        + G+D  R YPL RT + G+ +N
Sbjct: 973  FTLTKYSGYTPDLGESSVAGVAYNVFSRGIDQGR-YPLPRTISFGIQVN 1020