Pairwise Alignments

Query, 914 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 988 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  410 bits (1053), Expect = e-118
 Identities = 272/920 (29%), Positives = 453/920 (49%), Gaps = 57/920 (6%)

Query: 16  ITSSGSAFAQRKTITPIDSLITVGYATGSLKTISGSVEKITETQMNKDQITNPLEAIRGR 75
           +T +      R+    ++ ++ +GY T   + ++ +V K+ E   N    T+P+  + G+
Sbjct: 105 VTQNRLNIVMRENSVQLEEVVAIGYGTVKKEELTSAVTKVGEESFNAGVTTSPINLLNGK 164

Query: 76  VPGLTIQRGT-NGPAALDAVRLRGTTSLTSGNDPLIIVDGVFGDLSMLTSIYPTDIESFT 134
           VPGL+I+  + N P A   + LRG  S+ +G+ PLIIVDG +  +S L +I   DI+SF 
Sbjct: 165 VPGLSIRNTSGNDPNASPEIHLRGIGSIRAGSAPLIIVDGTYSTMSELQAINANDIKSFN 224

Query: 135 ILKDASETAQYGSRGASGVIEITTKKGMSGKTQVSYNGIFGISTVYKNLKMLSADDFRRV 194
           +LKD S  A YG+RG++GVI + TK    GK  + Y   +      + L+M+SAD++   
Sbjct: 225 VLKDGSSAAIYGTRGSNGVIIVETKNASKGKASIEYTSYYYTERPVRKLEMMSADEYMGY 284

Query: 195 ASERGISIL--DKGNNTDFQKEIEQTGLQQNHHIAFYGGSNESSYRVSLGFMDRQGVILN 252
             ++G S +  D G +TD+  ++ +        ++F  G+  SS R S+G+ D + +++N
Sbjct: 285 LKDKGHSTINNDYGFSTDWTDQLIRNNFSYYQGVSFSTGTENSSIRGSVGYRDSESMVIN 344

Query: 253 EDMKNFTSNMNMTQRMFDGFLNCELGMFGSIQKNHNLVDLQKTFYSAATFNPTYPNHKDP 312
              K  T  +N  Q  FD  L  E G         +  D    F  A  ++PT P +   
Sbjct: 345 TGNKQLTGRVNFKQYFFDKKLTIE-GTLNGANTQSDYTD-YGAFMQAIVYHPTAPVYNQE 402

Query: 313 DS-------GSWDGITTASQITNPLAWMEVQDHDATSHISTHARLTFNLMDELKLVLFGA 365
                    G ++ +   SQ+ N       + +  + ++S + +    ++  L +    +
Sbjct: 403 GKFFEYAGVGPYNPVALLSQVDN-----RGERYTYSGNLSANLK----VLPCLSVYAMMS 453

Query: 366 YTYNIIENSQYLPT----SVWA--HGQAYKGTKKMESLLGNMMLTYKKGWKKHYFDALAL 419
              +  E S+Y+      SV     GQA   T   +         Y      H   ALA 
Sbjct: 454 ANNDTYEGSKYISRDSRYSVLGGFEGQADMNTYFYKKRTFEAYANYSFSTDVHNLTALAG 513

Query: 420 AELQKETYTGFYTTVTNFNTDKFGYHNLQAGALRPWEGTNSY---YEQPHLASFMGRFNY 476
               +E  T    + + F TD  G +N+  G     +G  S     ++  L +F GR NY
Sbjct: 514 YSFNREDRTWHNASNSGFLTDIPGANNIGNGTYLE-DGLASMGRGQDESKLIAFFGRINY 572

Query: 477 TYADRYSLTMTARTDASSKFGANHKWGFFPSVSAAWVISEEKFMKRLPVIDNLKFRIGYG 536
           +Y  +Y    + R + S++FG NHKWG+FP+VSA W I EE F      + NLK R+G+G
Sbjct: 573 SYKGKYLFNASVRREGSTRFGENHKWGWFPAVSAGWRILEENFFSDATPLSNLKLRVGFG 632

Query: 537 LAGNQSGIDSYTTLSLVKPNGVIPVGNSAAVSLGDLRNTNPDLKWEVKHTFNTGIDLAMF 596
           + GNQ  I  Y +++     G            G + N NPDLKWE    +N G+D  ++
Sbjct: 633 ITGNQD-IPLYASIAKYNDLGYAYYNGKWDKVYGPVSNPNPDLKWEKNAEYNAGVDFGIW 691

Query: 597 GNRLLLSANYYNSKTTDMLYLYNVSVPPFTYNTLLANIGSMRNSGLEIAIGITPLKTQDM 656
            +RL  S +YY  KTTD+L  Y+  +P   Y+T+  N+G++ N G+E AIG   ++ +++
Sbjct: 692 NDRLTASVDYYYRKTTDLLDWYDAQMPSNIYSTIFTNVGTLTNQGIEFAIGYDVIRNKEL 751

Query: 657 ELNINANITFQQNKLLSL-SGMYNGELISAPEYKSLASLDGAGFHGGYNHIVYQVVGQPL 715
           + +++   ++ +NKL+SL +  Y    I+   Y  L+S      +G   +I+ +  G+P+
Sbjct: 752 KWHLDGGFSYNENKLVSLANSSYRANHIT---YNPLSS----PANGQTTYILEE--GKPI 802

Query: 716 GVFYLPRANGLVSDGNGGYTYDIADLNGGGVSLEDGEDRYVAGQAVPKTILGSNLSFRYK 775
           G +Y  +  G  S G   + ++  D +G   +  D +  Y+ G  +PK       +  +K
Sbjct: 803 GTYYGLKYRGFNSAGK--WVFEDRDEDG---AYSDKDYTYL-GNGLPKWYFNLASTLTWK 856

Query: 776 RFDISVQINGAFGHKIYNGTSLTYMNMNIFPDYNVMQEAPARNIKD-QTATDYWLENGAY 834
            FD S Q+ GA G K+ N   + Y N    P +N+++ A  R + D  T +DY+LE G Y
Sbjct: 857 DFDFSFQLRGAAGFKVLNTKRIYYENSVSLP-FNLLKSALGRPLNDAATFSDYYLEKGNY 915

Query: 835 VNFDYVTLGWNVPIEKVQKLKKYVRSLRLAFTVNNLATISGYSGLSPMINSSTVNSTLGL 894
           +  D +T+G+   + ++    KYV + R+  T  NL TI+GY+G+ P + +     T G 
Sbjct: 916 LKLDNITVGYTFDLSQL----KYVSNARIYATATNLLTITGYTGVDPEVGTGL---TPGF 968

Query: 895 DDKRGYPLARTYTLGLSINF 914
           DD   YP + T  LGL+I F
Sbjct: 969 DDSGYYPRSTTLMLGLNIKF 988