Pairwise Alignments

Query, 914 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 1146 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  348 bits (893), Expect = 1e-99
 Identities = 282/982 (28%), Positives = 450/982 (45%), Gaps = 141/982 (14%)

Query: 32   IDSLITVGYATGSLKTISGSVEKITETQMNKDQITNPLEAIRGRVPGLTIQRGTNGPAAL 91
            ID ++ VGY     + +S S+  +   Q+ +   ++  +A+ G++PG+ + + +  P   
Sbjct: 203  IDEVVVVGYGVQRKRDVSTSISSVKAEQIAEVSASDFRQALAGKMPGVQVTQPSGDPEGS 262

Query: 92   DAVRLRGTTSLTSGNDPLIIVDGVFGDLSMLTSIYPTDIESFTILKDASETAQYGSRGAS 151
             ++R+RG +++ +G+DPL I+DGV  +     ++   D+ES  +LKDAS  A YGSRG++
Sbjct: 263  VSIRVRGISTVNAGSDPLYIIDGVPVERGF-ANLNNNDVESVEVLKDASSAAIYGSRGSN 321

Query: 152  GVIEITTKKGMSGKTQVSYNGIFGISTVYKNLKMLSADDFRRVASE-RGISILDKG---- 206
            GVI ITTK+G S K +V Y+G +GI ++ K L ML+A  F   A +    S LD      
Sbjct: 322  GVIIITTKQGQSEKMKVQYDGYYGIQSISKKLPMLNAYQFAEFAKDGHDNSYLDANPGGS 381

Query: 207  -----------------------------NNTDFQKEIEQTGLQQNHHIAFYGGSNESSY 237
                                          +TD+Q  I ++    +H+++  G      Y
Sbjct: 382  PNDPNGMRPNSWERIPTELFPYLNGDQGLTDTDWQDAIFRSAATTSHNVSISGRGKTVGY 441

Query: 238  RVSLGFMDRQGVILNEDMKNFTSNMNMTQRMFDGFLNCELGM-FGSIQKNHNLVDLQKT- 295
             +S  + D++G+I+N D K ++  MN+  +    +   + G+ F       N VD   + 
Sbjct: 442  FISANYYDKEGIIINSDFKKYSMRMNLDGK----YKRLKFGLNFSPSYSTSNRVDASGSN 497

Query: 296  --FYSAATFNPTYPNHKDPDSGSWDGITTASQITNPLAWMEVQDHDATSHISTHARLTFN 353
                SA    P +P +    S ++ G     +I N         H+A  +    A L  +
Sbjct: 498  GIVQSALMMPPVWPVYNSDGSYNYQG-NGYWRIGNDY------QHNAVLNPVAMANLQSD 550

Query: 354  LMDELKLV--------LFGAYTYNII--------ENSQYLPTSVWAHGQAYKGTKKMESL 397
            ++D + +V        LF   TYNI          N QY  + +   GQ Y   K   + 
Sbjct: 551  VVDRMAIVGKVFAELELFKGLTYNISFGGDYYGSHNDQYRSSELPLLGQKYYDIKSNPTA 610

Query: 398  LG------NMMLTYKKGW-----KKHYFDALALAELQKETYTGFYTTVTNFNTDKFGYHN 446
                    N ++  K  +     + H  +A+ +   QKETY G   T T+F  D      
Sbjct: 611  YSSSGFYFNWLIENKINYNTVINEDHSINAVLVQSAQKETYKGDNVTATDFPNDYI--QT 668

Query: 447  LQAGALRPWEGTNSYYEQPHLASFMGRFNYTYADRYSLTMTARTDASSKFGANHKWGFFP 506
            +  G +       + +    +AS++ R  Y+Y  +Y  +   R D SS+FG N++WG+FP
Sbjct: 669  ISGGTVIKGASDKTQWS---IASYLARVQYSYKGKYMASGAIRADGSSRFGKNNRWGYFP 725

Query: 507  SVSAAWVISEEKFM---KRLPVIDNLKFRIGYGLAGNQSGIDSYTTLSLVK-PNGVIPVG 562
            S S AW +S E F    K L  +D+LK R  YG+ GN   I +Y  LSL+   N ++  G
Sbjct: 726  SASLAWRVSGEDFFTKAKFLSFVDDLKIRTSYGVTGNFQ-IGNYDHLSLMALDNYILGTG 784

Query: 563  NSAAVSLGDLRNT--NPDLKWEVKHTFNTGIDLAMFGNRLLLSANYYNSKTTDMLYLYNV 620
            N   V  G   NT  N DL WE     N G+DL MF   L ++ +YYN+ T++M  L NV
Sbjct: 785  NGQLVQ-GYKPNTIKNDDLSWEKNAMVNVGVDLQMFKGLLGITVDYYNTNTSNM--LLNV 841

Query: 621  SVPPFT-YNTLLANIGSMRNSGLEIAIGITPLKTQDMELNINANITFQQNKLLSLSGMYN 679
             VP  T Y+T L NIG + N G EIA+      T+D   + NAN     N++ +L G  N
Sbjct: 842  PVPHLTGYSTALMNIGKVNNRGWEIALTSQKNFTKDFGYSFNANYATNTNEVKAL-GPGN 900

Query: 680  GELISAPEYKSLASLDGAGFHGGYNHIVY-QVVGQPLGVFYLPRANGLVSDGNGGYTYD- 737
              +IS                G  +H  Y   VG+P+G +YL   +G+ S+      Y  
Sbjct: 901  APIIST---------------GSVDHAYYITKVGEPIGCYYLLVQDGIFSNEEELKKYPH 945

Query: 738  ----------IADLNGGGVSLEDGEDRYVAGQAVPKTILGSNLSFRYKRFDISVQINGAF 787
                        D++G GV ++  +DR + G  +P    G      YK  D+     G +
Sbjct: 946  FSNTQPGDFRFVDVDGDGV-MDLDKDRTIVGNYMPDFTYGFGGKVWYKGIDLDFNFQGVY 1004

Query: 788  GHKIYN-----------GTSLTYMNMNIF-----PDYNVMQEAPARNIKDQTATDYW-LE 830
            G++I N            T+ T + +N +     P    +  A  ++      T  W LE
Sbjct: 1005 GNEILNLNRRYIDNLEGNTNGTTIALNRWKSADNPGNGQVNRANRKSKGYNGRTSTWHLE 1064

Query: 831  NGAYVNFDYVTLGWNVPIEKVQKLKKYVRSLRLAFTVNNLATISGYSGLSPMINSSTVNS 890
            +G+Y+    VTLG+ +P    ++   +V  LR+  +  NL T + Y G +P +N+   NS
Sbjct: 1065 DGSYLRLQNVTLGYTLPQNLTRRF--FVEKLRVYVSGQNLWTSTNYGGYNPEVNARPSNS 1122

Query: 891  TLGLDDKRGYPLARTYTLGLSI 912
                +D   YPLA+T+  GL+I
Sbjct: 1123 LSPGEDYGTYPLAKTFLFGLNI 1144