Pairwise Alignments

Query, 401 a.a., capsular polysaccharide biosynthesis protein Cps4K (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 309 a.a., UDP-glucose 4-epimerase from Pseudomonas sp. RS175

 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 47/239 (19%)

Query: 3   ILVTGAKGFVGRNLC----AQ------LNNIKNGK-ARCYGDLKIEEVFEYDIDSTS--E 49
           +L+TG  GF+G +L     AQ      L+++  GK +    D    E+ E D+   +   
Sbjct: 6   VLITGGAGFIGSHLTDALLAQGHSVRILDDLSTGKRSNLPLDNPAVELIEGDVADAALVA 65

Query: 50  QLDAWCQKADFVFNLAGVNRPKEN-VEFMKGNFGFASTLLDTLKKHHNTCPVMLSSSAQ- 107
           +  A C     +  +A V    ++ V   + NF      + TL    N C  M  +  + 
Sbjct: 66  RAMAGCSAVAHLAAVASVQASVDDPVRTHQSNF------IGTL----NVCEAMRQAGVKR 115

Query: 108 ---ASLTGRFGNSEYGRS----------------KKAGEDLFLQYGKDTGAKVLVYRFPN 148
              AS    +GN+  G+S                K A E     Y +    + +V+RF N
Sbjct: 116 VLFASSAAVYGNNGEGQSIDEDTPKAPLTPYASDKLASEFYLDFYRRQHDLEPVVFRFFN 175

Query: 149 LYGKWCRPN--YNSAVATFCNNIANDLPIQV-SDSSVVLELLYIDDLVDEMIHALKGEE 204
           +YG    P+  Y+  ++ F       LPI +  D     + +Y++DLVD ++ A++  E
Sbjct: 176 IYGPRQDPSSPYSGVISIFSERAQKGLPITIFGDGEQTRDFVYVEDLVDLLVQAIEKTE 234