Pairwise Alignments

Query, 660 a.a., alpha-L-arabinofuranosidase A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 516 a.a., alpha-L-arabinofuranosidase from Caulobacter crescentus NA1000 Δfur

 Score = 84.0 bits (206), Expect = 2e-20
 Identities = 109/478 (22%), Positives = 174/478 (36%), Gaps = 104/478 (21%)

Query: 219 GLRKDLAQALADIHPGVFRFPGGCIVEGTDLETRYDWKKSVGPVENRPLNENRWQYTFTH 278
           G+R D+  AL  I   V R+PGGC  +       Y W+  +GP + RP  +N W      
Sbjct: 72  GVRSDVVGALKAIKTPVIRWPGGCFAD------EYHWRDGIGPRDKRPSRKNNW------ 119

Query: 279 RFYPDYYQSYGLGFYEYFLLSEEMGAAPLPILNCGLACQYQNNEEKAHVAVCDLDSYIQD 338
             +    ++   G +E+   +E++GA P   +N G +      E                
Sbjct: 120 --WGGSPETNAFGTHEFMDFAEQVGADPYVAVNVGSSNPTVMRE---------------- 161

Query: 339 ALDLIEFANGDVNTTWGKVRADMGHPAPFNLKYLGIGNEQWG-------KEYPERLEPFI 391
               IE+       T  + R   G   P+ + ++GIGNE WG       + Y      F 
Sbjct: 162 ---WIEYMTSPGEDTLAQERRANGRDKPWKVPFIGIGNESWGCGGEMTPEYYANEYRRFS 218

Query: 392 KALRKAHPEIMIVGSSGPNSEGKEFDYLWPEMKRLKA----DLVDEHFYRPES--W---- 441
               K      +  +SG NS    FD  W ++    A    D +  H+Y  ++  W    
Sbjct: 219 SFFHKNSDNPAVRVASGANS----FDVNWTDVVTKAAAKRMDAISLHYYTIQTGDWNKKG 274

Query: 442 ------------FLSQGARYDN--------YDRKGPKVFAGEYACH-------------G 468
                         +Q  R D+         DR  P+   G Y                G
Sbjct: 275 AATGFDKAAWGKSFAQTLRMDDLLRQHIAVLDRNDPQKRIGLYVDEWGTWYDTEPGTNPG 334

Query: 469 KGKKWNHFHAALLEAAFMTGLERNADIVHMATYAPLFAHVEGWQWRPDMIWFDNLNSVRT 528
              + N     +L A       ++A+ V MA  A     ++       +I       V T
Sbjct: 335 HLYQLNTLRDGVLAAVNFNIFHKHAERVRMANIAQTINVLQA------VILTKGDQMVLT 388

Query: 529 VSYYVQQLYAQNKGTNVLPLTMNKKPVTGAEGQNGLF-ASAVYDKDKNELIVKVANTS-D 586
            +YY  Q+Y   + +  +PL +    +  A  +   F ASA   KD  ++ V VAN + D
Sbjct: 389 PTYYAHQMYMPFQDSTAIPLEITAPEIDVAGSKIPAFNASAAKGKD-GKIYVAVANMALD 447

Query: 587 KTQPVSLTFEGLKKQDVLSEGRCITLSSLDQDKDNTLEQPFAITPQETPVTINGHALT 644
            +  ++++  GLK + V   G+ +T   +D   D      F   P   PV   G  L+
Sbjct: 448 DSVKLNVSLAGLKAKMV--SGQVLTADKMDAMND------FGAKPAVVPVPFKGGKLS 497