Pairwise Alignments

Query, 513 a.a., putative endo-arabinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 558 a.a., xylosidase/arabinosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 66/280 (23%), Positives = 111/280 (39%), Gaps = 46/280 (16%)

Query: 26  CTSSVFTPTPSANSWDDNYLSVAKMEDYRQWGTY-NVHDPSCRKLGDYYYMYSTDAIFGE 84
           C  +VFT     N   + ++S      Y+    Y +  DP   ++GD +YM S+      
Sbjct: 11  CLLTVFTAVAQKNYVSEVWVSDLGNGKYKNPVLYADYSDPDACRVGDDFYMTSSSFNC-- 68

Query: 85  NRKEAREKGVPLGFIQMRRSKDLVHWEFLGWAFPEIPEEAVQWVQSHAGGQGATNIWAPY 144
                      L  +Q+  SKDLV+W  +G A P     A+  +++    +    +WAP 
Sbjct: 69  -----------LPGLQILHSKDLVNWTIIGAAVP----YALTPIETPERPEHGNRVWAPS 113

Query: 145 IIPYKDKYRLYYCVSAFGRKTSYIGLAESTSPEGPWTQKGCIVKTDDSTAMNAIDPSVIA 204
           I  +  ++ +++     G       + ++  P+GPWT+   +           ID   + 
Sbjct: 114 IRHHNGEFYIFW-----GDPDQGAFMVKAKDPQGPWTEPVLV-----KPGKGIIDTCPLW 163

Query: 205 DENTGKWWMH-YGSFFGGLYCV----ELNPETGLALNEGDL---GHLVARRANYRKDNLE 256
           DE+   + +H Y     GL  V    ELN E   A+    +   GH             E
Sbjct: 164 DEDGKVYLVHAYAGSRAGLKSVITICELNKEATKAITPSRIIFDGH-------EAHQTCE 216

Query: 257 APEIIYHPELKQYYLFTSYDPLMTTYNVRVSRSDAAEGPF 296
            P+  ++     YY+F     + T + V V RS  A GP+
Sbjct: 217 GPK--FYKRNGYYYIFHPAGGVPTGWQV-VLRSKNAYGPY 253