Pairwise Alignments

Query, 513 a.a., putative endo-arabinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 512 a.a., beta-xylosidase (1,4-beta-D-xylan xylosidase) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 32/159 (20%)

Query: 60  NVHDPSCRKLGDYYYMYSTDAIFGENRKEAREKGVPLGFIQMRRSKDLVHWEFLGWAFPE 119
           +V DPS  ++ D YY   T + +               F  M  SKDLV+W+ +G  F +
Sbjct: 33  DVPDPSVIRIEDTYYATGTSSEWAP-------------FYPMFTSKDLVNWKQVGHVFTK 79

Query: 120 IPEEAVQWVQSHAGGQGATNIWAPYIIPYKDKYRLYYCVSAFGRKTSYIGLAESTSPEGP 179
            P     W  +        + WAP +  + +K   YY         SYIG+A S SP   
Sbjct: 80  QPS----WTSN--------SFWAPELFYHNNKVYCYYTARQKSTGISYIGVATSDSPLHE 127

Query: 180 WTQKGCIVKTDDSTAMNAIDPSVIADENTGKW--WMHYG 216
           +T  G IV+        AID + I D+N   +  W  YG
Sbjct: 128 FTDHGPIVE----YGKEAID-AFIYDDNGQLYISWKAYG 161



 Score = 32.0 bits (71), Expect = 5e-05
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 19/108 (17%)

Query: 199 DPSVIADENT-------GKWWMHYGSFFGGLYCVELNPETGLALNEGDLGHLVARRANYR 251
           DPSVI  E+T        +W   Y  F            +   +N   +GH+  ++ ++ 
Sbjct: 36  DPSVIRIEDTYYATGTSSEWAPFYPMF-----------TSKDLVNWKQVGHVFTKQPSWT 84

Query: 252 KDNLEAPEIIYHPELKQYYLFTSYDPLMTTYNVRVSRSDAAEGPFTDY 299
            ++  APE+ YH   K Y  +T+         + V+ SD+    FTD+
Sbjct: 85  SNSFWAPELFYHNN-KVYCYYTARQKSTGISYIGVATSDSPLHEFTDH 131