Pairwise Alignments

Query, 513 a.a., putative endo-arabinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 333 a.a., endo-1,4-beta-xylanase D precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.9 bits (128), Expect = 9e-12
 Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 12/164 (7%)

Query: 139 NIWAPYI----IPYKDKYRLYYCVSAFGRKTSYIGLAESTSPEGPWTQKGCIVKTDDSTA 194
           N WAP I    I  K KY  YY  +    K   IG+A + SP GP+T  G  + T   T 
Sbjct: 98  NAWAPCIEEKKIDGKYKYFFYYSANPTTNKGKQIGVAVADSPTGPFTDLGKPIITSSPTG 157

Query: 195 M-NAIDPSVIADENTGKWWMHYGSFFGGLYCVELNPETGLALNEGDLGHLVARRANYRK- 252
               ID  V  D  +GK ++++G+  G +   ELN +  L++ E     L  +    +  
Sbjct: 158 RGQQIDVDVFTDPVSGKSYLYWGN--GYMAGAELNDDM-LSIKEETTVVLTPKGGTLQTY 214

Query: 253 DNLEAPEIIYHPELKQYYLFTSYDPL-MTTYNVRVSRSDAAEGP 295
              EAP +IY   +  YY F S D      Y+V    + +  GP
Sbjct: 215 AYREAPYVIYRKGI--YYFFWSVDDTGSPNYHVVYGTAQSPLGP 256



 Score = 24.3 bits (51), Expect = 0.007
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 8/113 (7%)

Query: 199 DPSVIADENTGKWWMHYGSF----FGGLYCVELNPETGLALNEGDLGHLVARRANYRKDN 254
           DP V+    T +++++  S     +GG Y    + +      E  +   + +  ++   N
Sbjct: 39  DPEVLYSHQTKRYYIYPTSDGFPGWGGSYFKVFSSKNLKTWKEETVILEMGKNVSWANGN 98

Query: 255 LEAPEIIYHPELKQYYLFTSYDPLMTTYN---VRVSRSDAAEGPFTDYFGKAV 304
             AP I       +Y  F  Y    TT     + V+ +D+  GPFTD  GK +
Sbjct: 99  AWAPCIEEKKIDGKYKYFFYYSANPTTNKGKQIGVAVADSPTGPFTD-LGKPI 150