Pairwise Alignments

Query, 513 a.a., putative endo-arabinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 325 a.a., arabinan endo-1,5-alpha-L-arabinosidase A precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  112 bits (279), Expect = 3e-29
 Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 51/322 (15%)

Query: 59  YNVHDPSCRKLGD-YYYMYSTDAIFGENRKEAREKGVPLGFIQMRRSKDLVHWEFLGWAF 117
           Y++ DPS  +  D Y+Y+Y+T+ I          + +P+      RSKDL+ WE +G AF
Sbjct: 33  YSLPDPSVIRAEDGYFYLYATEDI----------RNLPI-----HRSKDLIKWESVGTAF 77

Query: 118 PEIPEEAVQWVQSHAGGQGATNIWAPYIIPYKDKYRLYYCVSAFGRK-TSYIGLAESTSP 176
            +         ++    +   N+WAP I    DKY LYY +S +G + T  IG+A +  P
Sbjct: 78  TD---------ETRPTFEPKGNLWAPDINKIGDKYVLYYSMSCWGGEWTCGIGVATADKP 128

Query: 177 EGPWTQKGCIVKTDDSTAMNAIDPSVIADENTGKWWMHYGSFFGGLYCVELNPETGLALN 236
           EGP+   G + ++++    N+IDP  I  E+ G+ +M +GS F G+Y +EL  + GL + 
Sbjct: 129 EGPFVDHGMMFRSNEIGVQNSIDPFYI--EDGGRKYMFWGS-FRGIYGIELTAD-GLKVK 184

Query: 237 EGDLGHLVARRANYRKDNLEAPEIIYHPELKQYYLF----TSYDPLMTTYNVRVSRSDAA 292
            G     +A  A       E   I  H +   YYLF    T  + L +TY   V RS + 
Sbjct: 185 SGADKKQIAGTA------YEGTYI--HKKNGYYYLFASTGTCCEGLKSTYQTVVGRSSSL 236

Query: 293 EGPFTDYFGKAVKDTTNNFPILTAPYRFENHTGWAGTAHCA-VFSDGEGNYFMAHQGRLS 351
            GP+ D  G+++ D  NN  +L       N+  + GT H A + +D   N ++ + G +S
Sbjct: 237 WGPYLDKQGRSMLD--NNHVVL-----IHNNKSFVGTGHNAELITDKADNDWILYHG-VS 288

Query: 352 PQNQLMVLHIRQLFFTPEGWPV 373
             N    + +       +GWPV
Sbjct: 289 VSNPYGRVLLLDRVDWKKGWPV 310