Pairwise Alignments

Query, 513 a.a., putative endo-arabinase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

Subject, 641 a.a., putative arabinan endo-1,5-alpha-L-arabinosidase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  222 bits (565), Expect = 4e-62
 Identities = 141/427 (33%), Positives = 197/427 (46%), Gaps = 76/427 (17%)

Query: 37  ANSWDDNYLSVAKMEDYRQWGTYNVHDPSCRKLGD-YYYMYSTDAIFGENRKEAREKGVP 95
           A ++ D+Y S +   +   W   NVHDP+  K  D YYYMY TDA +G            
Sbjct: 138 APTYVDDYTSFSAWSNRYDWNLANVHDPTVMKTDDGYYYMYQTDASYGNAHSGN------ 191

Query: 96  LGFIQMRRSKDLVHWEFLGWAFPEIP----EEAVQWVQSHAGGQGATN----IWAPYIIP 147
            G    RRSKDLV+WE+LG    E P    +E +   +   G +   N     WAP    
Sbjct: 192 -GHFHARRSKDLVNWEYLGATMSETPPTWIKEKLNAYRQEMGLEPIDNPSYGYWAPVARK 250

Query: 148 YKD-KYRLYYCV-------------------SAFGRKTSYIGLAESTSPEGP-WTQKGCI 186
             + KYR+YY +                        + ++IGL E++ P    W  KG +
Sbjct: 251 VSNGKYRMYYSIVITNYIQTGKPEIENNGNFDGSWTERAFIGLMETSDPASNIWEDKGFV 310

Query: 187 V-------KTDDSTA----------MNAIDPSVIADENTGKWWMHYGSFFGGLYCVELNP 229
           V       KTD   +          +NAIDP+ I  EN G+ W+ YGS+  G+  +++NP
Sbjct: 311 VCSASDKGKTDYGRSSINDWEGYFKINAIDPTYIITEN-GEHWLIYGSWHSGIAALQVNP 369

Query: 230 ETGLALN------------EGDLGHLVARRANYRKDNLEAPEIIYHPELKQYYLFTSYDP 277
           E G  LN                G ++A R   R    E PE+IY      YYLF +Y  
Sbjct: 370 EDGKPLNALGNPWDITGEDNSGYGKIIATRGTSRWQASEGPEVIYRDGY--YYLFLAYGS 427

Query: 278 LMTTYNVRVSRSDAAEGPFTDYFGKAVKDTTNNFPILTAPYRFENHTGWAGTAHCAVFSD 337
           L   YN RV RS   +GP+ D  G +   +   +PILTAPYRF+N  GW G +HC +F D
Sbjct: 428 LSVEYNTRVCRSKNIDGPYVDIHGNSAMGSAQLYPILTAPYRFDNSYGWVGISHCGIFDD 487

Query: 338 GEGNYFMAHQGRL-------SPQNQLMVLHIRQLFFTPEGWPVASPERYAGTASRQFSKE 390
           G GN+F   QGR           N +M+ H+R + +   GWP+  PERY        ++ 
Sbjct: 488 GAGNWFYTSQGRFPVNVGGNEYSNAIMMGHVRSIRWDANGWPLVMPERYGAVPQAPITEN 547

Query: 391 DLVGEWE 397
           ++ G+WE
Sbjct: 548 EIAGDWE 554